Heart related problems are increasing day by day and Electrocardiogram (ECG) signal are very important in diagnosis of heart related problems. There are various artifacts which get added in these signals and change the original signal; therefore there is a need of removal of these artifacts from the original signal. ECG signals are very low frequency signals of about 0.5Hz-100Hz and wavelet based denoising are very efficient for noise removal. Several experiments were conducted to show the effectiveness of the wavelet denoising method and compared the results with the soft and hard wavelet thresholding methods. The results are evaluated by calculating the signal to noise ratio and root mean square error.
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Performance Comparison Of Wavelet Based ECG Signal Denoising
Heart related problems are increasing day by day and Electrocardiogram (ECG) signal are very important in diagnosis of heart related problems. There are various artifacts which get added in these signals and change the original signal; therefore there is a need of removal of these artifacts from the original signal. ECG signals are very low frequency signals of about 0.5Hz-100Hz and wavelet based denoising are very efficient for noise removal. Several experiments were conducted to show the effectiveness of the wavelet denoising method and compared the results with the soft and hard wavelet thresholding methods. The results are evaluated by calculating the signal to noise ratio and root mean square error.
Heart related problems are increasing day by day and Electrocardiogram (ECG) signal are very important in diagnosis of heart related problems. There are various artifacts which get added in these signals and change the original signal; therefore there is a need of removal of these artifacts from the original signal. ECG signals are very low frequency signals of about 0.5Hz-100Hz and wavelet based denoising are very efficient for noise removal. Several experiments were conducted to show the effectiveness of the wavelet denoising method and compared the results with the soft and hard wavelet thresholding methods. The results are evaluated by calculating the signal to noise ratio and root mean square error.
Cummins College of Engineering for Women Pune*, PG Student*, Cummins College of Engineering for Women Pune, Faculty. chitrangi!!"#gmail.com *, ht$%atil&'#yahoo.com
A 3 % 7 R A C 7 8eart related pro9lems are increasin- da 9 da and 4lectrocardio-ram (4C5) si-nal are ver important in dia-nosis of heart related pro9lems$ 7here are various artifacts .hich -et added in these si-nals and chan-e the ori-inal si-nal: therefore there is a need of removal of these artifacts from the ori-inal si-nal$ 4C5 si-nals are ver lo. fre;uenc si-nals of a9out "$58<)1""8< and .avelet 9ased denoisin- are ver efficient for noise removal$ %everal e=periments .ere conducted to sho. the effectiveness of the .avelet denoisin- method and compared the results .ith the soft and hard .avelet thresholdin- methods$ 7he results are evaluated 9 calculatin- the si-nal to noise ratio and root mean s;uare error$ Inde= 7erm> 4C5 si-nal: .avelet denoisin-: %&R: RM%4:
I$ I&7R16?C7I1& The electrocardiogram (ECG) is the recording of the cardiac acti*ity and it is e+tensi*ely used for diagnosis of heart diseases. ,t is also an essential tool to allow monitoring %atients at home, there-y ad*ancing telemedicine a%%lications. .ecent contri-utions in this to%ic are re%orted in /0'1. E*en though these contri-utions are for different %ro2ects, the issue common to each is the use of ECG for remote monitoring and assistance under different telecommunication %latforms. The transmission of ECG often introduces noise due to %oor channel conditions. 3oreo*er, there are other ty%es of noise inherent in the data collection %rocess. These artifacts are %articularly significant during a stress test. The main sources of such artifacts are4 Power line interference, E3G noise, 5aseline wander noise, Colored noise, ,nstrumentation noise. Some recent rele*ant contri-utions ha*e %ro%osed solutions using a wide range of different techni6ues, such as %erfect reconstruction ma+imally decimated filter -an7s /&1 and nonlinear filter -an7s /81, ad*anced a*eraging /9,:1, the wa*elet transform /;01, ada%ti*e filtering /<1. This %a%er %resents different techni6ues of threshold estimation for denoising corru%ted ECG signal using wa*elet transform. The %erformance of different methods is analy=ed and com%ared using 3,T>5,H ECG data-ase, contaminated with muscle artifact noise and %ower line interference noise. II$ MA74RIA@ A&6 M47816%
A. ECG Denoising Using Wavelet Transform
Wa*elet ECG denoising is done -y following three -asic ste%s /'1. . 2avelet 6ecomposition> ?oisy ECG signal is con*erted into wa*elet domain. International Journal of Advance Foundation and Research in Computer (IJAFRC) Volume 1, Issue 5, Ma !"1#$ I%%& !'#( ) #(5'
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<. 2avelet 6enoisin-> Threshold is calculated -y a%%ro%riate threshold rule and significant wa*elet coefficients are selected -y either hard or soft thresholding. '. 2avelet Reconstruction> Wa*elet reconstruction is done -ased on selected wa*elet coefficients. 5. %oft and 8ard 7hresholdin-
Significant wa*elet coefficients from different le*els are selected to reconstruct the denoised signal. Selection of those wa*elet coefficients is done through thresholding %rocess. Thresholding methods are categori=ed into two grou%s4 hard thresholding and soft thresholding /&1 > /;1. @et denote the threshold. The hard threshold signal is if > , and is " if < . The soft threshold signal is () ( ) if > and is " if < . Performance of the denoising %rocess de%ends on the ty%e of thresholding method and thresholding rule used for the gi*en a%%lication. C. 7hreshold Calculatin- Rules
Aonoho has initially %ro%osed de>noising of signals -ased on fi+ed thresholding /91. Here, the *alue of threshold (t) is com%uted as4 () where, =MAAB".9:&8 3CA re%resents the median of wa*elet coefficients and n is the total num-er of wa*elet coefficients. There are four ty%es of thresholding rules mostly used -y different researchers on de>noising a%%lications /:1. . 5lo9al 7hresholdin->
This can -e considered a ty%e of fi+ed threshold or glo-al thresholding method and it is com%uted as4 (<) <. Minima= 7hresholdin-> 3inima+ threshold yields minima+ %erformance for 3ean S6uare Error (3SE) against ideal %rocedures. 3inima+ threshold also -eha*es as fi+ed threshold. This method does the 2o- of o-taining a minimum error -etween original signal and wa*elet coefficients of noise signal and de%ending on it selects a threshold *alue. '. Ri-rsure 7hresholdin-> ,t de%ends on the SteinDs un-iased estimate of ris7. ,n this rule, ris7 estimation for a %articular threshold *alue is done. ,t is an ada%ti*e thresholding method which is %ro%osed -y Aonoho and Eonstone and it is -ased on SteinDs un-iased li7elihood estimation %rinci%le /;1. &. 8eursure 7hresholdin-> When sure and glo-al thresholding methods are com-ined together, a new rule is formed named as Heursure threshold rule. Sure estimation method -ecomes worthless if the signal>to noise ratio of the signal is *ery %oor, then it will show more noises. ,n this 7ind of situation, the fi+ed form threshold is selected -y means of glo-al thresholding method.
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A. 0erformance Metrics
. Root Mean %;uare (RM%)>The root mean s6uare /81 is calculated as follows 4 (') <. %i-nal to &oise Ratio (%&R)> 5asically signal to noise ratio (S?.) is an engineering term for the %ower ratio -etween a signal and noise /81. ,t is e+%ressed in terms of the logarithmic deci-el scale. (&) where, () is the original signal, () is the denoised signal, F is the mean *alue, and ? is the total num-er of sam%les. III$ R4%?@7% To test the clinical information %reser*ation 6uality of denoisied ECG signal from the %ro%osed method, the two channel, 3,T>5,H Crrhythmia data-ase records /!1 are used. To test the ro-ustness of the %ro%osed method, e+%erimental analysis was carried out with si+ ma2or ty%es of noise *i=. 8" H=, white Gaussian, coloured, -aseline wander, electrode mo*ements and muscle artifact. ,n this %a%er, only < ty%es of noise, muscle artifact and 8" H=, results are shown and discussed. ?oise is added to the in%ut ECG signal which is ta7en from 3,T>5,H Crrhythmia data-ase. The -aseline wander noise has -een su%%ressed using mo*ing a*erage filter. This signal is treated as the original recorded signal. AWT is %erformed on this signal which is corru%ted with noise. The %erformances of the methods ha*e -een e*aluated in terms of .3SE and S?.. Figure shows ECG Signal from 3,T5,H arrhythmia data-ase record "'. Figure < shows the muscle artifact noise. Figure ' shows the ECG signal corru%ted with muscle artifact noise. 5aseline wander noise in this corru%ted signal was remo*ed using mo*ing a*erage filter and the AWT of the signal was com%uted using *arious threshold estimation rules with Gdaubechies and Gsymlet wa*elet family whose results are ta-ulated in ta-le , <. The -est %erformance was o-ser*ed at le*el < using GDb 2H wa*elet. Figure & shows the out%ut of hard threshold techni6ue used for denoising muscle artifact noise using riguresure threshold estimation. Figure 8 shows the 8" H= noise. Figure 9 shows the ECG signal corru%ted with 8" H= noise. 8" H= noise was remo*ed using riguresure threshold estimation at le*el < with GDb 2H gi*ing -est results. Figure : gi*es the result of Hard thresholding %erformed on ECG signal corru%ted with %owerline interferemce using A-< at le*el <. Ta-le ', & shows the *alue of .3SE and S?. of different ty%es of wa*elet thresholding %erformed on ECG signal corru%ted with 8" H= noise.
Fi-ure 1$ ECG Signal from 3,T5,H arrhythmia data-ase record no. "' International Journal of Advance Foundation and Research in Computer (IJAFRC) Volume 1, Issue 5, Ma !"1#$ I%%& !'#( ) #(5'
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Fi-ure !$ 3uscle Crtifact ?oise
Fi-ure '$ ECG signal corru%ted with muscle artifact noise
Fi-ure #$ Hard thresholding %erformed on ECG signal corru%ted with 3uscle artifact using A-< at le*el < and rigursure threshold 7a9le 1$ .3SE of different ty%es of wa*elet thresholding for 3uscle artefact noise
Wa*elet ?ame Thresholding Techni6ue GIni*ersalH G3inima+H GHuersureH G.igrsureH A-< Hard "."";& "."": ".""<9 ".""<9 Soft "."< ".""!' ".""8 ".""8 A-' Hard "."";" ".""98 ".""<; ".""<; Soft ".""9 "."";; ".""8 ".""8 A-& Hard "."":8 ".""98 ".""'' ".""'' Soft ".""!< "."":! ".""8' ".""8' A-8 Hard ".""9! ".""9& ".""'" ".""'" Soft "."";& "."":& ".""&; ".""&; Sym< Hard "."";& "."": ".""<9 ".""<9 Soft "."< ".""!' ".""8 ".""8 Sym ' Hard "."";" ".""98 ".""<; ".""<; Soft ".""9 "."";; ".""8 ".""8 Sym & Hard "."":9 ".""98 ".""<! ".""<! Soft ".""!< ".""; ".""8 ".""8 Sym 8 Hard "."":< ".""99 ".""'' ".""'' Soft "."";; "."":: ".""8' ".""8' International Journal of Advance Foundation and Research in Computer (IJAFRC) Volume 1, Issue 5, Ma !"1#$ I%%& !'#( ) #(5'
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7a9le !$ S?. of different ty%es of wa*elet thresholding for 3uscle artefact noise
Fi-ure 5$ Powerline ,nterference ?oise
Fi-ure B$ ECG signal corru%ted with Powerline ,nterference noise
Fi-ure *$ Hard thresholding %erformed on ECG signal corru%ted with %owerline interferemce using A-< at le*el <
7a9le '$ .3SE of different ty%es of wa*elet thresholding for 8" H= noise Wa*elet ?ame Thresholding Techni6ue GIni*ersalH G3inima+H GHuersureH G.igrsureH A-< Hard <&.!<'9 <9.':8& '&.!'99 '&.!'99 Soft <<.'8!! <&.""!9 <!.!:9 <!.!:9 A-' Hard <8.'"' <:.:& '&.'<;< '&.'<;< Soft <<.;&<9 <&.8"99 <!.<&&' <!.<&&' A-& Hard <8.;":' <:.";&< ''."&<& ''."&<& Soft <&.<'' <8.':"< <;.;" <;.;" A-8 Hard <9.8<9: <:.<":< ''.;'' ''.;'' Soft <&.;8"; <8.!&;8 <!.:<:< <!.:<:< Sym< Hard <&.!<'9 <9.':8& '&.!'99 '&.!'99 Soft <<.'8!! <&.""!9 <!.!:9 <!.!:9 Sym ' Hard <8.'"' <:.:& '&.'<;< '&.'<;< Soft <<.;&<9 <&.8"99 <!.<&&' <!.<&&' Sym & Hard <8.:<!8 <:."9'< '&.";9: '&.";9: Soft <&.<" <8.<'8! <!.<&8 <!.<&8 Sym 8 Hard <9.8<' <9.!;! ''.";' ''.";' Soft <&.&!&& <8.9&:& <;.!&& <;.!&& International Journal of Advance Foundation and Research in Computer (IJAFRC) Volume 1, Issue 5, Ma !"1#$ I%%& !'#( ) #(5'
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7a9le #$ S?. of different ty%es of wa*elet thresholding for 8" H= noise
IV$ C1&C@?%I1&
Com%utational com%etence ma7es wa*elet scheme attracti*e. The ma2or o-ser*ation from the set of e+%eriments is that rigrsure gi*es -est %erformance. ,t is o-ser*ed that %erformance of mini>ma+ J heursure is -etter than that of uni*ersal.
V$ R4F4R4&C4% /1 K. Hung, L.>T. Mhang, ,m%lementation of a WCP>-ased telemedicine system for %atient monitoring, ,EEE Trans. ,nf. Technol. 5iomed. : (<) (<""') "0":. Wa*elet ?ame Thresholding Techni6ue GIni*ersalH G3inima+H GHuersureH G.igrsureH A-< Hard &.;9<' 9.8&8 8."!:& 9.;;:! Soft '.9:! &.;&:' '.;'!& 9."";< A-' Hard 8.&;<< 8.;!8' 8.&;<< 9.<:8 Soft &.!'8 8.';89 8."8& 8.:8&" A-& Hard 9."&89 9.""; 9."8:' 9.9<<8 Soft 9."''" 9."9:: 9."'&& 9.';:& A-8 Hard 8.;'& 8.:<<! 8.!"8 9.&<99 Soft 8.9;! 8.':9 8.:": 8.!:' Sym< Hard &.;9<' 9.8&8 8."!:& 9.;;:! Soft '.9:! &.;&:' '.;'!& 9."";< Sym ' Hard 8.&;<< 8.;!8' 8.&;<< 9.<:8 Soft &.!'8 8.';89 8."8& 8.:8&" Sym & Hard 9.";"8 9."9' 9.";"8 9.8:!8 Soft 9.";"8 9."!! 9.";"8 9.<:;; Sym 8 Hard 9.&" 9.&" 9.&" 9.<;< Soft 9.&" 9.&" 9.&" 9.;!; Wa*elet ?ame Thresholding Techni6ue GIni*ersalH G3inima+H GHuersureH G.igrsureH A-< Hard "."<:; "."<<! "."<:" "."<<" Soft "."'<" "."<:; "."'< "."<&' A-' Hard "."<8; "."<&9 "."<8; "."<': Soft "."<:9 "."<9 "."<:' "."<8 A-& Hard "."<&< "."<& "."<&< "."<<: Soft "."<&' "."<&< "."<&' "."<'' A-8 Hard "."<9; "."<8 "."<9: "."<'< Soft "."<9; "."<9' "."<9; "."<&9 Sym< Hard "."<:; "."<<! "."<:" "."<<" Soft "."'<" "."<:; "."'< "."<&' Sym ' Hard "."<8; "."<&9 "."<8; "."<': Soft "."<:9 "."<9 "."<:' "."<8 Sym & Hard "."<& "."<& "."<& "."<<; Soft "."<& "."<& "."<& "."<'9 Sym 8 Hard "."<&" "."<&" "."<&" "."<'9 Soft "."<&" "."<&" "."<&" "."<'; International Journal of Advance Foundation and Research in Computer (IJAFRC) Volume 1, Issue 5, Ma !"1#$ I%%& !'#( ) #(5'
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/<1 C.H. Sal*ador, 3.P. Carrasco, 3.C.G. de 3ingo, C.3. Carrero, E.3. 3ontes, @.S. 3artNn, 3.C. Ca*ero, ,.F. @o=ano, E.@. 3onteagudo, Cirmed>cardio4 a GS3 and internet ser*ices>-ased system for out> ofhos%ital follow>u% of cardiac %atients, ,EEE Trans. ,nf. Technol. 5iomed. ! () (<""8) :'0;&. /'1 E. .odrNgue=, C. GoOi, C. ,llarramendi, .eal>time classification of ECGs on a PAC, ,EEE Trans. ,nf. Technol. 5iomed. ! () (<""8) <'0'&. /&1 P.F. Cfonso, W.E. Tom%7ins, T.Q. ?guyen, K. 3ichler, S. @uo, Com%aring stress ECG enhancement algorithms, ,EEE Eng. 3ed. 5iol. 3ag. 8 (') (!!9) ':0&&. /81 E.3. @es7i, ?. Hen=el, ECG -aseline wander and %owerline interference reduction using nonlinear filter -an7, Signal Process. '8 (&) (<""&) :;0:!'. /91 S. ,ra*anian, @. Tung, C no*el algorithm for cardiac -iosignal filtering -ased on filtered residue method, ,EEE Trans. 5iomed. Eng. &! () (<""<) '"0':. /:1 E.3. @es7i, .o-ust weighted a*eraging, ,EEE Trans. 5iomed. Eng. &! (;) (<""<) :!90;"&. /;1 P.E. Ti77anen, ?onlinear wa*elet and wa*elet %ac7et denoising of electrocardiogram signal, 5iol. Cy-ern. ;" (&) (!!!) <8!0<9:. /!1 C.L.>F. Ho, 5.W.>K. @ing, T.P.>@. Wong, C.L.>P. Chan, P.K.>S. Tam, Fu==y multiwa*elet denoising on ECG signal, Electron. @ett. '! (9) (<""') 9'09&. /"1 E. Ercele-i, Electrocardiogram signals de>noising using lifting>-ased discrete wa*elet transform, Com%ut. 5iol. 3ed. '& (9) (<""&) &:!0&!'. /1 S. Poornachandra, ?. Kumara*el, Hy%er>trim shrin7age for denoising of ECG signal, Aigital Signal Process. 8 (') (<""8) ':0'<:. /<1 P. Clmenar, C. Cl-iol, C new ada%ti*e scheme for ECG enhancement, Signal Process. :8 (') (!!!) <8'0<9'. /'1 Harishchandra T. Patil, ..S. Holam-e, ?ew a%%roach of threshold estimation for denoising ECG signal using wa*elet transform, ,ndia Conference (,?A,CR?), <"' Cnnual ,EEE Conference, 3um-ai, ,ndia, '>8 Aec. <"'. /&1 A. @. Aonoho, ,. 3. Eohnstone, ,deal denoising in an orthonormal -asis chosen from a li-rary of -ases, Technical re%ort, *ol. &9, Ae%artment of Statistics, Stanford Ini*ersity, !!&. /81 A. @. Aonoho, Ae>noising -y soft>thresholding, ,EEE Trans. on ,nf. Theory, !!8, *ol. &<, no. ', %%. 9'>9<:. /91 A. @. Aonoho, ,. 3. Eohnstone, Cda%ting to un7nown smoothness *ia wa*elet shrin7age, E. Cm. Stat. Cssoc. !", %%. <""><<&, Aec. !!8. /:1 A. @. Aonoho, 3. Petterli, .. C. Ae*ore, ,. Aau-echies, Aata com%ression and harmonic analysis, ,EEE Trans. ,nform. Theory *ol. &&, %%. <&'8><&:9, !!;. /;1 A. @. Aonoho, ,. 3. Eohnstone, 3inima+ estimation *ia wa*elet shrin7age, Cnn. Statist. *ol. <9, %%. ;:!>!<, !!;. International Journal of Advance Foundation and Research in Computer (IJAFRC) Volume 1, Issue 5, Ma !"1#$ I%%& !'#( ) #(5'
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/!1 The 3,T>5,H ECG Aata-ase4 %hysionet.orgB%hysio-an7Bdata-aseBmitd-.