Rice grain discolouration has a complex etiology and cannot be diagnosed prior to harvest. Disease was thought to be associated with fungal infections, but several studies contradicted this hypothesis. Early cvs Selenio and Loto were the most susceptible.
Rice grain discolouration has a complex etiology and cannot be diagnosed prior to harvest. Disease was thought to be associated with fungal infections, but several studies contradicted this hypothesis. Early cvs Selenio and Loto were the most susceptible.
Rice grain discolouration has a complex etiology and cannot be diagnosed prior to harvest. Disease was thought to be associated with fungal infections, but several studies contradicted this hypothesis. Early cvs Selenio and Loto were the most susceptible.
Rice grain discolouration has a complex etiology and
cannot be diagnosed prior to harvest. In Italy, the disease was thought to be associated with fungal infections, how- ever several studies contradicted this hypothesis. We re- port the distribution of grain discolouration, the most sus- ceptible Italian rice varieties, and the effects of epidemics of brown spot, induced by Cochliobolus miyabeanus, and abiotic factors, such as incidence of grains with open glumes, chemical treatments, nitrogen fertilization, and time of sowing, on disease incidence over three years. Among 39 heavily diseased rice lots, the early cvs Selenio and Loto were the most susceptible. We did not find any significant correlation between incidence of grain dis- colouration and incidence of brown spot. In contrast, in- cidence of discoloured grains was weakly correlated with incidence of grains with open glumes (r = 0.521 P = 0.001), while incidence of brown spot was better correlat- ed with incidence of grains with sealed glumes (r = 0.570, P < 0.001) than to incidence of grains with open glumes (r = 0.355, P = 0.026). On susceptible cv. Selenio, percent of grains with open glumes varied among years, but in- creased significantly from milk dough stage to fully ripe maturation of kernels (P < 0.001). The highest percent of grains with open glumes was found for late-sown rice. However, late sowing reduced significantly (P 0.001) the incidence of grain discolouration, whereas chemical and fungicide treatments had no significant effect. We specu- late that grain discolouration may have a bacterial rather than a fungal aetiology. Key words: Cochliobolus miyabeanus, Oryza sativa; fungicides, acibenzolar-S-methyl, prohexadione-calci- um, aetiology. INTRODUCTION Rice grain discolouration is a disease of great impor- tance for its worldwide distribution and the substantial Corresponding author: P. Cortesi Fax: +39.02.50316781 E-mail: paolo.cortesi@unimi.it damage it causes in tropical and sub-tropical countries (Zeigler and Alvarez, 1987; Duveiller et al., 1988, 1990; Rott et al., 1989; Cottyn et al., 1996). In Italy, the disease occurs in all major rice-growing areas with incidence ranging from 1% to 30%; medium- and short-grain rice varieties are more susceptible than the long-grain ones (Pizzatti et al., 2004; Pizzatti, 2005). On milled rice, dis- coloured grains show brownish-black irregular lesions, chalkiness and shrivelling, and their incidence in milled rice lots cannot exceed 1.5%. To meet this threshold, mills sustain additional costs to discard discoloured grains, therefore they reduce the price paid to the farmers by about 2.5 /ton for each 1% of discoloured grains above the threshold (Cortesi, unpublished information). Grain discolouration has a complex etiology and can- not be diagnosed prior to harvest based on symptoms. In tropical and sub-tropical countries it was associated with sheath rot, blast and brown spot epidemics caused by the pathogenic fungi Sarocladium oryzae, Magnaporthe oryzae and Cochliobolus miyabeanus, respectively, as well as with sheath brown rot, grain rot and bacterial brown stripe in- duced by the pathogenic bacteria Burkholderia glumae, Pseudomonas fuscovaginae and Acidovorax avenae subsp. avenae, respectively (Ou, 1985; Zeigler and Alvarez, 1987; Zeigler et al., 1987; Webster and Gunnel, 1992; Cottyn et al., 1996). In Italy, the rice grain microflora is composed of both pathogenic and saprophytic fungi, such as C. miyabeanus, M. oryzae, Alternaria spp., Epicoc- cum spp., Penicillium spp., Nigrospora spp. and Phoma spp. (Caufin and Moletti, 1988; Picco et al., 2002), and unidentified bacteria (Baldacci and Corbetta, 1964). Cochliobolus miyabeanus was the only fungal pathogen isolated from discoloured grains with appreciable fre- quency (Cofelice et al., 2002). The presence of C. miyabeanus on discoloured grains suggested that it had a primary role in grain discoloura- tion aetiology (Fazli and Schroeder, 1966; Haegi et al., 2002). However, several evidences contradict this hypoth- esis. First, in Italy and Texas (USA), fungicide treatments controlled brown spot epidemics, but they were ineffec- tive against grain discolouration (Marchetti and Petersen, 1984; Cortesi and Giuditta, 2003) and, unexpectedly, in- cidence of discoloured grains was higher for rice from treated than from the untreated plots (Moletti et al., Journal of Plant Pathology (2008), 90 (2), 197-209 Edizioni ETS Pisa, 2008 197 EFFECT OF CHEMICALS, NITROGEN, TIME OF SOWING AND PANICLE BROWN SPOT EPIDEMICS ON RICE GRAIN DISCOLOURATION IN ITALY C. Pizzatti and P. Cortesi Istituto di Patologia Vegetale, Universit degli Studi, Via Celoria 2, 20133 Milano, Italy 006_JPP_77RP_197 21-07-2008 10:24 Pagina 197 1996). Second, brown spot incidence on spikelets was rarely correlated with incidence of discoloured grains and, furthermore, a poor correlation was found between the isolation frequency of C. miyabeanus and grain dis- colouration (Marchetti and Petersen, 1984; Cofelice et al., 2002). These results would support the hypothesis of a secondary role of C. miyabeanus on grain discolouration. The infestations of the stink bug Oebalus pugnax and nitrogen fertilization may enhance grain discolouration. Severe infestations of the stink bug and the bug Lepto- coria oratorius were highly correlated with the incidence of discoloured grains. However, O. pugnax was not re- sponsible for grain discolouration, although it may have favoured the spread of pathogens through the feeding sheaths (Marchetti and Petersen, 1984). Nitrogen may act in the same way, favouring the formation of early en- try sites subsequently infected by microbes. In fact, grains from paddies fertilized with high amounts of ni- trogen showed unsealed lemmas and paleas, and dis- coloured pericarps were visible through the openings, suggesting the hypothesis that the disease was correlat- ed to the percentage of grains with unsealed glumes (Moletti et al., 1996). Finally, the role of the leaf bug Trigonotylus caelestialium as a causal agent of the dis- ease was recently proposed, based on greenhouse ex- periments, but no data on the population size were re- ported (Giudici and Villa, 2006). Since the incidence of grain discolouration in the USA and in the Philippines was positively correlated only with severe infestations of rice bugs (Marchetti and Petersen, 1984; Jahn et al., 2004), absence of biological and population size data for T. caelestialium leaves an open question about its role in the aetiology of grain discolouration. In Italy, to our knowledge, the aetiology of grain dis- colouration is still unknown, because of the lack of ex- perimental results supporting the role of C. miyabeanus, nitrogen fertilization, open glumes or insects infestation (Moletti et al., 1996; Cofelice et al., 2002; Haegi et al., 2002; Giudici and Villa, 2006). To clarify the uncertain and complex interactions between grain discolouration, brown spot and some abiotic factors, we conducted this research with the fol- lowing objectives: (i) to identify the Italian rice varieties most susceptible to this disorder; (ii) to investigate the correlations between incidence of discoloured grains, brown spot and grains with open glumes, and (iii) to assess if chemical treatments, date of sowing and nitro- gen fertilization may affect the incidence of rice grain discolouration. MATERIALS AND METHODS Incidence of grain discolouration and rice variety susceptibility. A survey was carried out in collaboration with the Rice Research Centre, Castello dAgogna (Pavia, northern Italy) of the Ente Nazionale Risi (ENR). In 2001, technicians at the ENR Provincial of- fices retained 1 kg of rough rice for each rice lot sample exceeding 4% and 2.75% of discoloured grains for short- and medium-grain, and long-grain varieties, re- spectively. We chose these thresholds because they can- not be overcome for rough rice to be sold on the inter- national market. From each sample, 100 g of rough rice was milled and the amount of whole kernel weighted (g). Whole kernels were visually observed and dis- coloured grains were separated and weighted (g). For milled rice, the percent of discoloured grains was calcu- lated as discoloured grains/whole kernels (w/w). Dis- ease distribution was determined as frequencies of dis- eased samples per area of origin and per variety. Rice variety susceptibility was determined based on average incidence of discoloured grains. All ENR samples were delivered to the Institute of Plant Pathology, University of Milan, for further analy- ses. To determine the level of correlation between inci- dence of brown spot and grain discolouration, between incidence of brown spot and grains with open glumes, and between incidence of grain discolouration and open glumes two sub-samples of 100 grains of rough rice were randomly taken from each diseased sample. One was used to determine incidence of grains with symp- toms of brown spot, by visually checking the glumes. The other was used to determine the incidence of grains with open glumes by forcing lemma and palea to open by applying a small pressure at the tips of the grain with a forceps. Then, grains from the two sub-samples, named grains with open glumes and grains with sealed glumes, were hand-hulled, and the brown rice was visually checked to separate discoloured grains. In- cidence of grain discolouration for each sub-sample was calculated as percent of discoloured grains. Field experiments. Field experiments were designed to test the role of chemical treatments, date of sowing and nitrogen fertilization on the incidence and severity of brown spot and on the incidence of grain discoloura- tion, both on grains with open glumes and sealed glumes. The experiment was designed as a three-way factorial randomized complete block split-plot design with four replications in 1999 and 2000, and with three replications in 2001. Each simple plot was 21 m 2 . Field trials were carried out at Rosasco (Pavia province, Italy) using Oriza sativa subsp. japonica, early cv. Selenio, known to be susceptible to grain discolouration (Pizzatti et al., 2004). The chemicals used were two fungicides, azoxystrobin and tricyclazole, the Systemic Acquired Re- sistance (SAR) activator acibenzolar-S-methyl, and the growth regulator prohexadione-calcium, known for be- ing effective against some bacterial pathogens on specific host-pathogen combinations (Friedrich et al., 1996; Lawton et al., 1996; Ruess et al., 1996). Acibenzolar-S- 198 Rice grain discolouration Journal of Plant Pathology (2008), 90 (2), 197-209 006_JPP_77RP_197 21-07-2008 10:24 Pagina 198 methyl was also tank mixed with tricyclazole and with prohexadione-calcium. Chemicals were applied as single or double treatments between the end of tillering and heading (Table 1), spraying 500 l/ha of an aqueous solu- tion with the motorised backpack sprayer Fox F320 and an hand-held 1.5 m boom, operating at 500 Kpa. Each chemical-treated plot was subdivided for the two sub- plot factors: time of sowing (early and late), and nitrogen fertilization (high and low). For early sowing, rice was seeded by mid-April (between 9 and 17 April), whereas for late sowing it was seeded by mid-May (between 6 and 10 May). The two levels of nitrogen fertilization dif- fered by 30 kg/ha and the difference was obtained with the top-dress fertilization, applying 50 and 80 kg/ha of N as urea, at late tillering (panicle 1-2 mm in length) to plots fertilized with low and high level of N, respectively. Panicle brown spot incidence (as percent of infected panicle) and severity (as percent infected panicle area) were assessed at harvest by visually checking 50 ran- domly chosen panicles in each simple plot, and the effi- cacy of each chemical was calculated by comparison with untreated check plots (Cortesi and Giuditta, 2003). In 1999 and 2000, incidence of grains with open glumes was monitored at three phenological stages of fruit development: early milk (mid- and end-August for early and late sowing, respectively), hard dough (early- and mid-September for early and late sowing, respective- ly) and at harvest (mid- and end-September-early-Octo- ber for early and late sowing, respectively), whereas in 2001 it was assessed at harvest (mid-September and ear- ly-October for early and late sowing, respectively) (Lan- cashire et al., 1991). In 1999 and 2000, ten panicles were randomly harvested from each simple plot, allowed to dry in the shade, and hand-threshed. In 2001, a sample of about 0.5 kg of rough rice was taken from each simple plot at harvest. Incidence of grains with glumes open or sealed was determined as described above. Incidence of grain discolouration was assessed for the two sub-samples, open glumes and sealed glumes in 2000 and 2001. Following hulling, each sam- ple of 25 grains was visually checked to separate dis- coloured grains and percent of discoloured grains was calculated. Rice was harvested at maturity with an Iseki har- vester. A sample of 100 g of air-dried rough rice from each simple plot was used to determine the milling yield and the percent of discoloured grains on milled rice as described above. Data analysis. The data obtained from ENR samples were submitted to correlation analysis using the MSTAT- C statistical package (Nissen, 1983). We tested for signifi- cant correlations, P 0.05, between incidence of brown spot and grain discolouration, between incidence of brown spot and grains with glumes open, and between incidence of grain discolouration and grains with glumes open. The data obtained from field experiments were submitted to analysis of variance (ANOVA) with a gener- al linear model for split-plot experimental design, and Duncans multiple range tests using MSTAT-C statistical package. Significance of interactions was evaluated first at P 0.20. Data expressed as percentage were arcsin- square-root-transformed to stabilize variances. RESULTS Rice variety susceptibility and factors correlated with incidence of grain discolouration. The survey showed the 39 diseased samples were mostly from Pied- mont (north west Italy) and included 13 varieties: 5 short-grain, 7 medium-grain and 1 long-grain (Fig. 1). Incidence of grain discolouration of the most suscepti- Journal of Plant Pathology (2008), 90 (2), 197-209 Pizzatti and Cortesi 199 Fig. 1. Distribution of discoloured rice samples (N = 39) among provinces (A) in the Piedmont region () and in the Lombardy region ( ), and (B) among varieties grouped by grain type. 006_JPP_77RP_197 21-07-2008 10:24 Pagina 199 ble short-grain cv. Selenio and medium-grain cv. Loto was 13.7% (s.e. = 1.6; N = 18) and 14.6% (s.e. = 1.8; N = 7), respectively. In 2001, cvs Selenio and Loto were grown on 9% and 12% of the rice area, respectively. Incidence of brown spot was not correlated with in- cidence of discoloured grains and with incidence of grains with open glumes as well. In contrast, incidence of discoloured grains was slightly but significantly corre- lated with incidence of grains with open glumes for short-grain and all varieties pooled, but not for medi- um-grain varieties. Finally, we showed that incidence of brown spot was better correlated with incidence of grains with sealed glumes, than with incidence of grains with open glumes (Table 2). Dynamics of grains with open glumes. On cv. Sele- nio, percent of grains with open glumes increased sig- nificantly (P < 0.001) from milk dough stage to harvest of kernels, from 2.9% to 19.1% in 1999, and from 46.7% to 54.8%, in 2000. In 2001, at harvest it was 36,6%. A significant increase (P < 0.001) occurred at high level of nitrogen, from 8.9% to 11.8% in 1999 and from 47.8% to 60.3% in 2000. The date of sowing in- fluenced significantly (P < 0.001) the incidence of grains with open glumes. However, in 2000, it increased from 45.8% to 62.4% delaying the sowing, whereas in 2001 it decreased from 41.1% to 32.1%. In 2000, the interac- tion between nitrogen fertilization and date of sowing was significant (P < 0.001) and the highest percent of grains with open glumes was 71.3%, for plot with high nitrogen and late sowing. The effect of the chemicals was significant (P < 0.003) in 2000 only, with the highest percentage of grains with open glumes, 60.1%, found on plots treated with azoxystrobin (Tables 3 and 4). Incidence of grain discolouration for rice with open and sealed glumes. Average incidence of discoloured grain was 2.9% in 2000 and 6.3% in 2001. In 2000, dis- ease incidence increased from hard dough phenological stage to harvest, and in both years it was significantly higher (P 0.001) on grains with open glumes, 5% and 9.8%, than on grains with sealed glumes, 0.8% and 2.9%. In both years, neither the chemicals nor the ni- trogen fertilization had a significant effect on the disease incidence. On the contrary, the date of sowing had a sig- nificant effect (P 0.001) and higher disease incidence was found on early sown rice, 4.6% and 9%, than on late sown rice, 1.2% and 3.7%, in 2000 and 2001 re- spectively. The interaction between the date of sowing and the glumes type was significant only in 2000, and the highest disease incidence, 8.2%, was found for early sown rice with open glumes, while the interaction of the two factors with the nitrogen fertilization did not signif- icantly change disease incidence. The interaction be- tween the chemicals and the date of sowing was signifi- cant only in 2001 (P < 0.08), and the disease increased 200 Rice grain discolouration Journal of Plant Pathology (2008), 90 (2), 197-209 T a b l e
1 . C h e m i c a l s ,
a p p l i c a t i o n
r a t e ,
s p r a y
s c h e d u l e ,
g r o w t h
s t a g e
a n d
d a t e
o f
t r e a t m e n t
o n
r i c e
c v .
S e l e n i o
a t
R o s a s c o
( P a v i a ) ,
I t a l y . a
A p p l i c a t i o n
r a t e
i n
1 9 9 9 ;
b
A p p l i c a t i o n
r a t e
i n
2 0 0 0
a n d
2 0 0 1 S p r a y
s c h e d u l e
a n d
d a t e
o f
a p p l i c a t i o n 1 9 9 9 2 0 0 0 2 0 0 1 C h e m i c a l s A p p l i c a t i o n r a t e ( m l ,
g
a . i . / h a ) G r o w t h s t a g e E a r l y s o w i n g L a t e s o w i n g G r o w t h s t a g e E a r l y s o w i n g L a t e s o w i n g G r o w t h s t a g e E a r l y s o w i n g L a t e s o w i n g T r i c y c l a z o l e
( B e a m
W P
-
D o w
A g r o s c i e n c e s ) 4 5 0 H e a d i n g 2 7
J u l y 6
A u g u s t H e a d i n g 2 9
J u l y 1 2
A u g u s t H e a d i n g 3 1
J u l y 1 4
A u g u s t A z o x y s t r o b i n
( A m i s t a r
S C
-
S y n g e n t a ) 3 1 2 . 5 a
a n d 2 5 0 b H e a d i n g 2 7
J u l y 6
A u g u s t H e a d i n g 2 9
J u l y 1 2
A u g u s t H e a d i n g 3 1 J u l y 1 4
A u g u s t A c i b e n z o l a r - S - m e t h y l
( B i o n
W G
-
S y n g e n t a ) 7 0 H e a d i n g 2 7
J u l y 6
A u g u s t H e a d i n g 2 9
J u l y 1 2
A u g u s t - - - A c i b e n z o l a r - S - m e t h y l 7 0 E n d
o f
t i l l e r i n g +
h e a d i n g 7
+
2 7
J u l y 7
J u l y
+
6 A u g u s t H e a d i n g
+
2 w k s
a f t e r 2 9
J u l y
+
1 2 A u g u s t 1 2
+
2 4 A u g u s t - - - T r i c y c l a z o l e
+
a c i b e n z o l a r - S - m e t h y l 4 5 0
+
7 0 H e a d i n g 2 7
J u l y 6
A u g u s t - - - - - - A z o x y s t r o b i n
+
a c i b e n z o l a r - S - m e t h y l 3 1 2 . 5
+
7 0 H e a d i n g 2 7
J u l y 6
A u g u s t - - - - - - P r o h e x a d i o n e - C a
( R e g a l i s
-
B a s f ) 2 0 H e a d i n g 2 7
J u l y 6
A u g u s t H e a d i n g
+
2 w k s
a f t e r 2 9
J u l y
+ 1 2 A u g u s t 1 2
+
2 4 A u g u s t - - - P r o h e x a d i o n e - C a
+
a c i b e n z o l a r - S
m e t h y l 2 0
+
7 0 H e a d i n g 2 7
J u l y 6
A u g u s t - - - - - - 006_JPP_77RP_197 21-07-2008 10:24 Pagina 200 significantly, from 2.3% to 5.7%, on rice of the late sowing plots treated with tricyclazole (Tables 5 and 6). Panicle brown spot and grain discolouration epi- demics and milling yield. Symptoms of brown spot were found on 21.3%, 90.9% and 100% of untreated panicle in 1999-2001, respectively, and the corresponding severi- ty was 11.8%, 62.5% and 21.5%. Although the chemi- cals had a significant effect on the disease in 1999 and in 2000 (P 0.02 for incidence and severity), only azoxys- trobin in 2000 determined a significant reduction of brown spot incidence and severity. In 2000 and 2001, years of more severe epidemics, low nitrogen input sig- nificantly increased panicle brown spot incidence in 2000, and severity in both years (P = 0.045 for incidence in 2000; P = 0.07 and P < 0.001 for severity in 1999 and 2000, respectively). Less consistent was the effect of the date of sowing. On early sown rice, the most severe epi- demic occurred in 1999 (P < 0.001 for incidence and severity), whereas disease severity was lower in 2000 (P = 0.053). The interaction between nitrogen fertilization and date of sowing was significant, but the effect was not consistent. In 1999, lower incidence of brown spot was found on late sown rice treated with high input of nitro- gen, whereas in 2001 was the opposite (Table 7 and 8). Average incidence of grain discolouration, was 0.8% in 1999, 1.9% in 2000 and 3.1% in 2001. High input of nitrogen significantly (P < 0.001) increased the disease from 1.6% to 2.3% in 2000, whereas the delay of date of sowing reduced significantly (P < 0.001) discoloured grains: from 3% to 0.8% in 2000 and from 4% to 1.9% in 2001 (Table 7 and 8). Milling yield was not influenced by chemical treat- ments, whereas high input of nitrogen in 2000 and in 2001 (P = 0.005 and P = 0.01, respectively), and late sowing in all three years (P 0.001), had a significant positive effect (Table 7 and 8). DISCUSSION In Italy, grain discolouration of rice adds to other grain defects, such as greening, shrivelling, chalkiness etc., low- ering quality and market value. The disease has a contro- versial etiology and is a common problem with some rice varieties (Moletti et al., 1996; Infantino et al., 1997; Cofe- lice et al., 2002; Cortesi and Giuditta, 2003; Pizzatti, 2005). Our survey showed that grain discolouration is widespread, but it occurs more frequently on short-grain than on medium-grain varieties, whereas long-grain vari- eties, grown on roughly 60% of rice area, are rarely af- fected. Early varieties, such as the short-grain cv. Selenio and the medium-grain cv. Loto, are the most susceptible, however these varieties are more often diseased in No- vara and Vercelli provinces than in Pavia province, which alone has the largest area grown with cvs. Loto and Sele- Journal of Plant Pathology (2008), 90 (2), 197-209 Pizzatti and Cortesi 201 T a b l e
2 . C o r r e l a t i o n
b e t w e e n
i n c i d e n c e
o f
b r o w n
s p o t
a n d
i n c i d e n c e
o f
g r a i n
d i s c o l o u r a t i o n ,
g r a i n s
w i t h
o p e n
g l u m e s
a n d
s e a l e d
g l u m e s
o n
r i c e
s a m p l e s
o f
s h o r t -
a n d
m e d i u m - g r a i n
v a r i e t i e s
c o l l e c t e d
i n
P i e d m o n t
a n d
i n
L o m b a r d y
i n
2 0 0 1 . a
A l l
s a m p l e s
p o o l e d .
b
S h o r t - g r a i n
r i c e
v a r i e t i e s .
c
M e d i u m - g r a i n
r i c e
v a r i e t i e s . I n c i d e n c e
o f
g r a i n
d i s c o l o u r a t i o n
( % ) I n c i d e n c e
o f
g r a i n s
w i t h
o p e n
g l u m e s
( % ) I n c i d e n c e
o f
g r a i n s
w i t h
s e a l e d
g l u m e s
( % ) F a c t o r N r P r P r P 3 9 a - 0 . 1 0 6 0 . 4 2 5 - 0 . 2 9 7 0 . 2 0 6 2 4 b - 0 . 1 2 0 0 . 5 7 5 - 0 . 2 1 7 0 . 3 0 8 I n c i d e n c e
o f
b r o w n
s p o t
( % ) 1 4 c - 0 . 1 1 6 0 . 6 9 2 - 0 . 4 2 2 0 . 1 3 1 3 9 0 . 5 2 1 0 . 0 0 1 2 4 - 0 . 6 0 6 0 . 0 0 2 I n c i d e n c e
o f
g r a i n s
w i t h
o p e n
g l u m e s
( % ) 1 4 0 . 4 0 4 0 . 1 5 0 3 9 0 . 3 5 5 0 . 0 2 6 2 4 0 . 4 2 6 0 . 0 3 8 I n c i d e n c e
o f
b r o w n
s p o t
o n
g r a i n s
w i t h
o p e n g l u m e s
( % ) 1 4 0 . 1 2 1 0 . 6 7 9 3 9 0 . 5 7 0 < 0 . 0 0 1 2 4 0 . 5 7 3 0 . 0 0 3 I n c i d e n c e
o f
b r o w n
s p o t
o n
g r a i n s
w i t h
s e a l e d g l u m e s
( % ) 1 4 0 . 8 1 5 < 0 . 0 0 1 006_JPP_77RP_197 21-07-2008 10:24 Pagina 201 nio (www.enterisi.it). Therefore, the spatial distribution and incidence of grain discolouration are not strictly re- lated with varietal susceptibility, but other factors such as crop cycle, environment or spatial distribution of the pathogen/s may modulate disease epidemics. Cochliobolus miyabeanus was suggested as the most important causal agent of grain discolouration because it produces toxins (Infantino et al., 1997; Cofelice et al., 2002). However, these toxins cause discolouration ex- clusively following early infections and partial removal of the glumes (Haegi et al., 2002). This finding agrees with early observation by Moletti et al. (1996), who found discolouration of grains localized underneath open glumes, entry sites for several species of fungi, C. miyabeanus included. In our study, we did not find evi- dence supporting the C. miyabeanus aetiology of grain discolouration. First, we showed with several varieties, including the susceptible cv. Selenio, that incidence of grains with symptoms of brown spot was not correlated with either incidence of discoloured grains (r = -0.106, P = 0.425) and incidence of grains with open glumes (r = -0.207, P = 0.206). Second, incidence of grains with symptoms of brown spot was more correlated with inci- dence of grains with sealed glumes (r = 0.570, P < 0.001), than with incidence of grains with open glumes (r = 0.355, P = 0.026). Third, incidence of discoloured grains was significant but slightly correlated with per- cent of grains with open glumes, even for short-grain varieties (r = 0.606, P = 0.002). We conclude that grain discolouration cannot be attributed to epidemics of C. miyabeanus, but it may have a different and complex ae- tiology, hypothesis supported by the lack of fungicides efficacy against the disease (see also Moletti et al., 1996; Cortesi and Giuditta, 2003) In our field experiment, we tested, on the susceptible cv. Selenio, whether incidence of grain discolouration and frequency of grains with open glumes were influ- enced by epidemics of panicle brown spot, or by abiotic factors such as the date of sowing, the rate of nitrogen and chemicals and fungicide treatments. We provided evidence that panicle brown spot epidemics, incidence of grain discolouration and frequency of grains with open glumes always increased during rice maturation, but the final values of the three parameters varied inde- pendently over the years. The highest incidence of grain discolouration occurred in 2001, but it was not associat- ed to the highest frequency of grains with open glumes nor with the highest severity of brown spot occurred in 2000. The delay of the date of sowing, from mid-April to mid-May was the most important factor for reducing 202 Rice grain discolouration Journal of Plant Pathology (2008), 90 (2), 197-209 Table 3. Effect of chemicals, nitrogen fertilization and date of sowing on incidence of grains with open glumes of rice cv. Selenio, at three phenological stages of fruit development, at Rosasco (Pavia), Italy. Grains with open glumes (%) Factor 1999 2000 2001 Untreated control 10.14 b n.s. c 52.75 b d 32.0 n.s. Tricyclazole 9.64 54.52 b 37.67 Azoxystrobin 10.11 60.12 a 40.17 Acibenzolar-S-methyl 9.53 53.67 b - Acibenzolar-S-methyl (2 treatments) 9.47 51.58 b - Tricyclazole + Acibenzolar-S-methyl 9.09 - - Azoxystrobin + Acibenzolar-S-methyl 13.86 - - Prohexadione-Ca 12.06 55.12 b - Prohexadione-Ca (2 treatments) - 50.71 b - Chemicals a Prohexadione-Ca + Acibenzolar-S-methyl 9.31 - - Low 8.94 a 47.85 a 35.89 n.s. N-fertilization High 11.76 b 60.29 b 37.33 Early (Mid-April) 10.25 n.s. 45.77 a 41.11 a Date of sowing Late (Mid-May) 10.46 62.36 b 32.11 b 1 st milk dough (End-August) 2.86 a 46.65 a - 2 nd hard dough (Mid-September) 9.11 b 60.79 c Date of sampling 3 rd harvest (Mid-October) 19.09 c 54.77 b a See table 1 for details. b Mean value. c Not significant. d Duncans multiple range test P = 0.05. Means with the same letter are not significantly different. 006_JPP_77RP_197 21-07-2008 10:24 Pagina 202 J o u r n a l
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C o r t e s i 2 0 3 Table 4. ANOVA to test the effects of chemicals, nitrogen fertilization, date of sowing and date of sampling on incidence of grains with open glumes of rice cv. Selenio at Rosas- co (Pavia), Italy. 1999 2000 2001 Source df MS a F P df MS F P df MS F P Replication 2 0.031 2.879 0.086 3 0.319 37.052 < 0.001 2 0.047 2.658 0.184 Chemicals (A) 8 0.026 2.418 0.063 6 0.058 6.723 < 0.001 2 0.025 1.407 n.s. Error 16 0.011 18 0.009 4 0.018 N fertilization (B) 1 0.168 9.471 0.007 1 1.574 170.519 < 0.001 1 0.001 0.120 n.s. A x B 8 0.009 0.536 n.s. b 6 0.006 0.699 n.s. 2 0.007 0.774 n.s. Error 18 0.018 21 0.009 6 Date of sowing (C) 1 0.016 1.083 n.s. 1 2.683 143.974 < 0.001 1 0.083 52.695 < 0.001 A x C 8 0.004 0.293 n.s. 6 0.011 0.601 n.s. 2 0.010 6.465 0.012 B x C 1 0.003 0.177 n.s. 1 0.289 15.517 < 0.001 1 0.002 1.056 n.s. A x B x C 8 0.013 0.866 n.s. 6 0.027 1.451 0.197 2 0.002 1.015 n.s. Error - - - - - - - - 12 0.002 Sampling date (D) 2 2.688 179.213 < 0.001 2 0.714 38.296 < 0.001 A x D 16 0.017 1.164 n.s. 12 0.030 1.583 0.098 B x D 2 0.008 0.564 n.s. 2 0.038 2.053 0.131 A x B x D 16 0.012 0.778 n.s. 12 0.023 1.209 n.s. C x D 2 0.125 8.343 < 0.001 2 1.377 73.895 < 0.001 A x C x D 16 0.013 0.864 n.s. 12 0.014 0.754 n.s. B x C x D 2 0.008 0.506 n.s. 2 0.323 17.322 < 0.001 A x B x C x D 16 0.011 0.728 n.s. 12 0.010 0.520 n.s. Error 180 0.015 210 0.019 Total 323 335 35 a Mean square. b P values > 0.2 were indicated as not significant. 0 0 6 _ J P P _ 7 7 R P _ 1 9 7
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2 0 3 incidence of grain discolouration, despite of significant increase of incidence of grains with open glumes for the late sowing. On the contrary, nitrogen fertilization and chemical treatments did not have any significant effects, with the exception of azoxystrobin, which increased in- cidence of grains with open glumes. Propiconazole and iprodione, and high input of nitrogen significantly in- creased incidence of discoloured grains on the short- grain cv. Elio (Moletti et al., 1996), results not con- firmed in our study for cv. Selenio. Altogether our results indicate that in Italy grain dis- colouration is restricted to early varieties with short- or medium-grain, and it occurs more frequently in the provinces of Piedmont than Lombardy. After a thor- ough testing of several hypotheses, we conclude that in- cidence of grain discolouration is not correlated with in- fections of C. miyabeanus to panicles, but is weakly cor- related with percentage of grains with open glumes. Sig- nificant less disease can be obtained delaying the date of sowing, although late sowing determines the greatest in- crease of grains with open glumes. Therefore, openings between glumes could be entry sites for pathogens caus- ing outbreaks only when favourable environmental con- ditions meet susceptible plant growth stages. In tropical and sub-tropical countries the seed-borne bacteria Burkholderia glumae, Pseudomonas fuscovaginae and Acidovorax avenae subsp. avenae are reported as causal agents of grain discolouration on symptomless panicles (Zeigler and Alvarez, 1990; Cottyn et al., 1996). We recently reported the presence of A. avenae subsp. avenae in Italy (Cortesi et al., 2005), and we found the bacterium associated with sterile panicles and dis- coloured grains (Cortesi et al., 2008). In this study, how- ever, we failed to control grain discolouration with acibezolar-S-methyl and prohexadione-calcium. This re- sult will not rule out the bacterial aetiology, since these compounds are effective only against some bacterial pathogens (Friedrich et al., 1996; Lawton et al., 1996; Ruess et al., 1996). Investigating the bacterial aetiology of grain discolouration will be the next step of our research. ACKNOWLEDGEMENTS We thank Alessandro Bermano for allowing us to con- duct this study in his farm, and for technical assistance. We also thank researchers and technicians of the Ente Nazionale Risi, Centro Ricerce sul Riso, Castello dA- gogna (PV), Italy, for technical assistance. This research was funded in part by Ente Nazionale Risi, Milan, Italy. 204 Rice grain discolouration Journal of Plant Pathology (2008), 90 (2), 197-209 Table 5. Effect of chemicals, nitrogen fertilization and date of sowing on incidence of grain discolouration for rice cv. Selenio with open and sealed glumes at Rosasco (Pavia), Italy. Grain discolouration (%) 2000 2001 Factor Hard dough Harvest Harvest Chemicals a Untreated control 1.75 b n.s. c 4.06 n.s. 5.67 n.s. Tricyclazole 0.75 2.13 6.83 Azoxystrobin 0.50 2.00 6.50 Acibenzolar-S-methyl 0.88 3.00 - Acibenzolar-S-methyl (2 treatments) 0.50 3.13 - Tricyclazole + Acibenzolar-S-methyl - - - Azoxystrobin + Acibenzolar-S-methyl - - - Prohexadione-Ca 1.00 2.88 - Prohexadione-Ca (2 treatments) 0.63 3.13 - Prohexadione-Ca + Acibenzolar-S-methyl - - - N-fertilization Low 0.79 n.s. 2.71 n.s. 6.67 n.s. High 0.93 3.09 6.00 Date of sowing Early (Mid-April) 1.32 a d 4.63 a 9.00 a Late (Mid-May) 0.39 b 1.18 b 3.67 b Glumes type Open glumes 1.32 a 5.02 a 9.78 a Sealed glumes 0.39 b 0.79 b 2.89 b a See table 1 for details. b Mean value. c Not significant. d Duncans multiple range test P = 0.05. Mean with the same letter are not significantly different. 006_JPP_77RP_197 21-07-2008 10:24 Pagina 204 J o u r n a l
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C o r t e s i 2 0 5 Table 6. ANOVA to test the effects of chemicals, nitrogen fertilization and date of sowing on incidence of grain discolouration for rice cv. Selenio with open and sealed glumes at Rosasco (Pavia), Italy. 2000 2001 Hard dough Harvest Harvest Source df MS a F P df MS F P df MS F P Replication 3 0.019 2.926 0.062 3 0.010 0.744 n.s. b 2 0.004 0.102 n.s. Chemicals (A) 6 0.012 1.755 0.166 6 0.008 0.585 n.s. 2 0.016 0.448 n.s. Error 18 0.007 18 0.014 4 0.035 N fertilization (B) 1 0.002 0.238 n.s. b 1 0.001 0.097 n.s. 1 0.003 0.122 n.s. A x B 6 0.004 0.421 n.s. 6 0.003 0.233 n.s. 2 0.005 0.174 n.s. Error 21 0.010 21 0.014 6 0.028 Date of sowing (C) 1 0.066 10.910 0.001 1 0.490 36.370 < 0.001 1 0.283 29.002 < 0.001 A x C 6 0.004 0.621 n.s. 6 0.011 0.850 n.s. 2 0.026 2.658 0.084 B x C 1 0.004 0.602 n.s. 1 0.001 0.047 n.s. 1 0.006 0.627 n.s. A x B x C 6 0.001 1.738 0.118 6 0.002 0.129 n.s. 2 0.010 1.038 n.s. Glumes type (D) 1 0.066 10.910 0.001 1 1.029 76.283 < 0.001 1 0.592 60.599 < 0.001 A x D 6 0.006 0.911 n.s. 6 0.005 0.407 n.s. 2 0.018 1.819 0.177 B x D 1 < 0.001 0.044 n.s. 1 0.008 0.620 n.s. 1 0.004 0.340 n.s. A x B x D 6 0.005 0.905 n.s. 6 0.014 1.002 n.s. 2 0.012 1.261 n.s. C x D 1 0.090 14.810 < 0.001 1 0.328 24.291 < 0.001 1 0.017 1.762 0.193 A x C x D 6 0.007 1.169 n.s. 6 0.002 0.111 n.s. 2 0.002 0.247 n.s. B x C x D 1 < 0.001 0.004 n.s. 1 0.066 4.865 0.029 1 0.009 0.881 n.s. A x B x C x D 6 0.003 0.445 n.s. 6 0.008 0.590 n.s. 2 0.012 1.234 n.s. Error 126 0.006 126 0.013 36 0.010 Total 223 223 71 a Mean square. b P values > 0.2 were indicated as not significant. 0 0 6 _ J P P _ 7 7 R P _ 1 9 7
2 1 - 0 7 - 2 0 0 8
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1 9 7 - 2 0 9 Table 7. Effect of chemicals, nitrogen fertilization and date of sowing on panicle brown spot, grain discolouration and milling yield of rice cv. Selenio at Rosasco (Pavia), Italy. Panicle brown spot Grain discolouration (%) Milling yield (%) Incidence (%) Severity (%) Factor 1999 2000 2001 1999 2000 2001 1999 2000 2001 1999 2000 2001 Untreated control 21.25 b n.s. c 90.87 a d 100 11.83 n.s. c 62.52 a 21.54 n.s. e 0.76 n.s. 1.90 n.s. 3.07 n.s. 60.32 n.s. 63.13 n.s. 55.21 n.s. Tricyclazole 17.25 90.62 a 100 10.10 56.51 a 21.29 0.91 1.91 2.89 58.77 62.63 55.57 Azoxystrobin 16.62 78.12 b 100 8.73 34.80 b 20.00 0.70 1.94 3.32 60.68 64.73 57.39 Acibenzolar-S-methyl 16.12 90.00 a - 8.83 57.52 a - 0.75 1.98 - 59.79 61.50 - Acibenzolar-S-methyl (2 treatments) 20.37 90.62 a - 10.97 62.37 a - 0.91 2.01 - 60.44 62.27 - Tricyclazole + Acibenzolar-S- methyl 15.00 - - 7.81 - - 0.91 - - 58.00 - - Azoxystrobin + Acibenzolar-S- methyl 18.37 - - 9.77 - - 0.83 - - 59.29 - - Prohexadione-Ca 20.87 95.62 a - 12.44 67.05 a - 0.74 2.04 - 60.97 60.68 - Prohexadione-Ca (2 treatments) - 96.25 a - - 66.28 a - - 1.65 - - 63.27 - Chemicals a Prohexadione-Ca + Acibenzolar- S-methyl 21.37 - - 11.92 - - 0.73 - - 61.26 - - Low 19.00 n.s. 92.07 a 100 10.97 n.s. 63.65 a 22.47 a 0.78 n.s. 1.56 a 3.23 n.s. 59.97 n.s. 61.38 a 54.76 a N-fertilization High 18.17 88.54 b 100 9.57 52.65 b 19.42 b 0.83 2.28 b 2.89 59.92 63.82 b 57.35 b Early (Mid-April) 20.78 a 89.00 n.s. 100 11.86 a 55.43 a 20.86 n.s. 0.83 n.s. 3.01 a 4.03 a 58.75 a 57.87 a 53.13 a Date of sowing Late (Mid-May) 16.39 b 91.61 100 8.67 b 60.87 b 21.03 0.78 0.82 b 1.88 b 61.13 b 67.33 b 58.97 b a See table 1 for details. b Mean value. c Duncans multiple range test P = 0.05 not significant. d Mean with the same letter are not significantly different. e ANOVA not significant. 0 0 6 _ J P P _ 7 7 R P _ 1 9 7
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C o r t e s i 2 0 7 Table 8. ANOVA to test the effects of chemicals, nitrogen fertilization and date of sowing on panicle brown spot, grain discolouration and milling yield of rice cv. Selenio at Rosasco (Pavia), Italy. 1999 2000 2001 Factor Source df MS a F P df MS a F P df MS a F P Replication 3 0.089 15.091 < 0.001 3 0.277 8.298 0.001 n.d. c Chemicals (A) 8 0.018 3.067 0.016 6 0.185 5.533 0.002 Error 24 0.006 18 0.033 N fertilization (B) 1 0.007 0.653 n.s. b 1 0.216 4.548 0.045 A x B 8 0.011 1.112 n.s. 6 0.024 0.508 n.s. Error 27 0.010 21 0.047 Date of sowing (C) 1 0.139 28.718 < 0.001 1 0.087 1.556 n.s. A x C 8 0.005 0.937 n.s. 6 0.09 0.160 n.s. B x C 1 0.051 10.413 0.002 1 0.096 1.714 0.197 A x B x C 8 0.002 0.345 n.s. 6 0.034 0.606 n.s. Error 54 0.005 42 0.056 Panicle brown spot incidence Total 143 111 Replication 3 0.052 12.985 < 0.001 3 0.251 15.813 < 0.001 2 0.005 3.855 0.117 Chemicals (A) 8 0.012 3.052 0.016 6 0.229 14.451 < 0.001 2 0.001 0.845 n.s. Error 24 0.004 18 0.016 4 0.001 N fertilization (B) 1 0.022 3.556 0.070 1 0.428 19.374 < 0.001 1 0.013 23.299 0.003 A x B 8 0.005 0.736 n.s. 6 0.006 0.292 n.s. 2 0.002 2.962 0.127 Error 27 0.006 21 0.022 6 0.001 Date of sowing (C) 1 0.109 22.698 < 0.001 1 0.100 3.947 0.053 1 0.000 0.008 n.s. A x C 8 0.003 0.557 n.s. 6 0.022 0.884 n.s. 2 0.004 2.094 0.166 B x C 1 0.015 3.143 0.082 1 0.056 2.196 0.146 1 0.017 10.129 0.008 A x B x C 8 0.002 0.323 n.s. 6 0.018 0.706 n.s. 2 0.001 0.385 n.s. Error 54 0.005 42 0.025 12 0.002 Panicle brown spot severity Total 143 111 35 Replication 3 0.002 3.942 0.020 3 0.017 25.580 < 0.001 2 0.001 1.340 n.s. Chemicals (A) 8 < 0.001 0.570 n.s. 6 < 0.001 0.358 n.s. 2 < 0.001 0.267 n.s. Error 24 0.001 18 0.001 4 0.001 N fertilization (B) 1 < 0.001 1.433 n.s. 1 0.021 21.862 < 0.001 1 0.001 3.754 0.101 Grain discolouration A x B 8 < 0.001 1.320 n.s. 6 0.001 0.768 n.s. 2 < 0.001 0.584 n.s. 0 0 6 _ J P P _ 7 7 R P _ 1 9 7
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1 9 7 - 2 0 9 N fertilization (B) 1 < 0.001 1.433 n.s. 1 0.021 21.862 < 0.001 1 0.001 3.754 0.101 A x B 8 < 0.001 1.320 n.s. 6 0.001 0.768 n.s. 2 < 0.001 0.584 n.s. Error 27 < 0.001 21 0.001 6 < 0.001 Date of sowing (C) 1 0.001 1.385 n.s. 1 0.175 117.435 < 0.001 1 0.044 76.480 < 0.001 A x C 8 < 0.001 0.403 n.s. 6 < 0.001 0.74 n.s. 2 0.001 1.810 0.206 B x C 1 0.001 1.849 0.179 1 < 0.001 0.015 n.s. 1 < 0.001 0.180 n.s. A x B x C 8 < 0.001 0.900 n.s. 6 0.001 0.983 n.s. 2 0.001 0.912 n.s. Error 54 < 0.001 42 0.001 12 0.001 Total 143 111 35 Replication 3 0.002 1.469 n.s. 3 0.017 12.670 < 0.001 2 0.001 1.096 n.s. Chemicals (A) 8 0.002 1.162 n.s. 6 0.003 2.187 0.093 2 0.002 1.516 n.s. Error 24 0.002 18 0.001 4 0.001 N fertilization (B) 1 < 0.001 0.010 n.s. 1 0.018 9.739 0.005 1 0.006 12.498 0.012 A x B 8 < 0.001 0.263 n.s. 6 0.002 1.318 n.s. 2 < 0.001 0.022 n.s. Error 27 0.001 21 0.002 6 < 0.001 Date of sowing (C) 1 0.021 17.621 < 0.001 1 0.266 98.004 < 0.001 1 0.031 20.265 0.001 A x C 8 < 0.001 0.187 n.s. 6 0.002 0.584 n.s. 2 < 0.001 0.127 n.s. B x C 1 0.004 3.173 0.080 1 0.001 0.239 n.s. 1 0.001 0.337 n.s. A x B x C 8 0.002 1.282 n.s. 6 0.003 1.199 n.s. 2 < 0.001 0.161 n.s. Error 54 0.001 42 0.003 12 0.002 Milling yield Total 143 111 35 a Mean square. b P values > 0.2 were indicated as not significant. c Not done. 0 0 6 _ J P P _ 7 7 R P _ 1 9 7
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2 0 8 REFERENCES Baldacci E., Corbetta G., 1964. Ricerche sulla microflora delle cariossidi di riso dopo conservazione in magazzino e in condizioni sperimentali. Il Riso 13: 79-88. Caufin A., Moletti M., 1988. Indagine riguardante i funghi presenti sul risone alla raccolta nelle diverse zone risicole italiane. 10 Convegno Internazionale sulla Risicoltura, Ver- celli 1988: 271-278. Cofelice G., Conca G., Infantino A., Riccioni L., Russo S., Porta-Puglia A., 2002. Osservazioni sulla microflora e le al- terazioni cromatiche del risone e del riso lavorato. Informa- tore Fitopatologico 52(2): 58-63. Cortesi P., Bartoli F., Pizzatti C., Bertocchi D., Schaad N.W., 2008. Panicle sterility and grain discolouration: new and emerging bacterial diseases of rice in Italy. In: Fatmi M.B., Collmer A., Iacobellis N.S., Mansfield J.W., Murillo J., Schaad N.W. and Ullrich M. (eds.). Pseudomonas syringae Pathovars and Related Pathogens-Identification, Epidemi- ology and Genomics, pp. 391-411. 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