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Department of Mechanical, Aerospace and Nuclear Engineering, Rensselaer Polytechnic Institute, Troy, NY 12180, USA
The Mind Research Network, 1101 Yale Blvd. NE, Albuquerque, NM 87106, USA
c
Measurement and Control Engineering Research Center, College of Engineering, Idaho State University, Pocatello, ID 83201, USA
b
a r t i c l e
i n f o
Keywords:
Biomedical signal processing
Prosthetics
Myoelectric control
Psychophysiology
Mother wavelet
EMG
EEG
VPA
Pattern recognition
Daubechies (db 44)
a b s t r a c t
During the last two decades, wavelet transform has become a common signal processing technique in
various areas. Selection of the most similar mother wavelet function has been a challenge for the application of wavelet transform in signal processing. This paper introduces Daubechies 44 (db44) as the most
similar mother wavelet function across a variety of biological signals. Three-hundred and twenty four
potential mother wavelet functions were selected and investigated in the search for the most similar
function. The algorithms were validated by three categories of biological signals: forearm electromyographic (EMG), electroencephalographic (EEG), and vaginal pulse amplitude (VPA). Surface and intramuscular EMG signals were collected from multiple locations on the upper forearm of subjects during ten
hand motions. EEG was recorded from three monopolar AgAgCl electrodes (Pz, POz, and Oz) during
visual stimulus presentation. VPA, a useful source for female sexuality research, were recorded during
a study of alcohol and stimuli on sexual behaviors. In this research, after extensive studies on mother
wavelet functions, results show that db44 has the most similarity across these classes of biosignals.
Published by Elsevier Ltd.
1. Introduction
Biosignal processing has been rapidly developing, increasing the
understanding of complex biological processes in a wide variety of
areas. Wavelet transform (Daubechies, 1991) is a powerful timefrequency approach which has been applied to multiple domains
of biosignal processing, such as EMG (e.g. Englehart, Hudgins, &
Parker, 2001), EEG (e.g. Kurt, Sezgin, Akin, Kirbas, & Bayram, 2009;
Rosso et al., 2001; Subasi, 2005; Ting, Guo-zheng, Bang-hua, &
Hong, 2008), ECG (e.g. Engin, Fedakar, Engin, & Korurek, 2007;
Manikandan & Dandapat, 2008; Singh & Tiwari, 2006), VPA (e.g.
Raee, Raee, & Michaelsen, 2009). A signicant focus on the application of wavelet transforms (e.g. Englehart et al., 2001; Farina,
Lucas, & Doncarli, 2008) has permitted rapid development in the
eld. However, the selection of the most appropriate mother wavelet to characterize commonalities amongst signals within a given
domain is still lacking in biosignal processing. The main contributions to nd the optimum basis function can be found in several
papers (e.g. Brechet, Lucas, Doncarli, & Farina, 2007; Farina, do
Nascimento, Lucas, & Doncarli, 2007; Flanders, 2002; Landolsi,
2006; Lucas, Gaufriau, Pascual, Doncarli, & Farina, 2008; Raee &
Tse, 2009; Singh & Tiwari, 2006; Tse, Yang, & Tam, 2004).
The mother wavelet function is the main base of wavelet transforms that would permit identication of correlated coefcients
across multiple signals. The more similar the mother wavelet function is to the wavelet coefcients across signals, the more precisely
the signal of interest can be identied and isolated; hence, identication of a mother wavelet function is of paramount signicance.
The Daubechies (db) wavelet functions (Daubechies, 1988) have
been applied in several areas with the lower orders (db1 to db20)
used most often (Raee & Tse, 2009). The few peer-reviewed papers
about the application of higher order db refer to Antonino-Daviu,
Riera-Guasp, Folch, and Palomares (2006) and Raee and Tse (2009)
who implemented them for mechanical systems.
This paper focuses on the most similar wavelet basis function
matched with complex biosignals such as surface and intramuscular EMG, EEG, and VPA signals (Raee, Raee, et al., 2009).
2. Measures
2.1. Surface and intramuscular EMG signals
EMG signals have broad applications in various areas, especially
in prosthetics and myoelectric control (Asghari Oskoei & Hu, 2007).
The experimental surface and intramuscular EMG signals used in
this research have been provided from the Institute of Biomedical
Engineering at the University of New Brunswick with a protocol
approved by the universitys Research Ethics Board (Hargrove,
Englehart, & Hudgins, 2007). Two different data acquisition
6191
systems were used to collect surface and intramuscular EMG signals (Hermens et al., 1999). For surface EMG signals, a 16-electrode
linear array with interelectrode spacing of 2 cm was used. Each
channel was ltered between 10 and 500 Hz and amplied with
a gain of 2000. For intramuscular EMG, needles were implanted
in the pronator and supinator teres, exor digitorum sublimas,
extensor digitorum communis, exor and extensor carpi ulnaris.
These were used to record information regarding grip, wrist exion
and rotation, and gross movement. These six channels of data were
ltered between 10 and 3000 Hz and also amplied with a gain of
2000. These were recorded in six subjects while they performed 10
hand movements for 5 s each, followed by a 2 min resting period.
All subjects denied fatigue during these exercises. The location of
surface and needle electrodes is depicted in Fig. 1 in a cross section
of the forearm. The motions includes forearm pronation, forearm
Fig. 1. A cross section of the upper forearm to illustrate the locations of 16 surface
electrodes and six needle electrodes. Source: Hargrove, Englehart, & Hudgins, 2007,
with permission.
Forearm Supination
Forearm Pronation
1
1
Wrist Flexion
Wrist Extension
5
3
PSD (V 2/Hz)
1
Wrist Abduction
2
1
Wrist Adduction
2
1
Relax
Chuck Grip
0.5
2
0
Spread Fingers
Key Grip
1
100
200
300
Frequency (Hz)
400
100
200
300
400
Frequency (Hz)
Fig. 2. Power spectrum density (V2/Hz) of surface EMG signals of 10 hand motions recorded from one of the 16 channels of the data acquisition system.
6192
al., 1995) and is used in this study. VPA was collected using the
Biopac (Model MP100) data acquisition system. The signal is rst
band-pass ltered between 0.5 and 30 Hz. The sampling rate was
xed at 80 Hz.
Using PSD, the frequency content of VPA signals are depicted in
Fig. 5 for one specic subject. Low-frequency VPA from 20 subjects
was recorded in six conditions. Each subject was tested watching a
neutral movie followed by an erotic movie with normal blood alcohol levels (BAL), 0.025 BAL, and 0.08 BAL.
2000
2000
1800
1600
1500
1400
1200
1000
1000
500
Wavelet (Daubechies, 1991) is a capable transform with a exible resolution in both time- and frequency-domains, which can
mainly be divided into discrete and continuous forms; the former
is faster because of low computational time, but the continuous
type is more efcient and reliable because it maintains all information without down-sampling. Continuous wavelet transform of a
signal st 2 L2 R can be dened as
600
0
400
200
0
10
20
30
40
50
Frequency (Hz)
CWTt; x
Fig. 3. Power spectrum density (V2/Hz) of EEG signals recorded from one of the
three channels of the data acquisition system.
x
x0
st 0 w
1
x 0
0
t tdt
x0
1
1
hst; wti
0 c w 2p
2.3. VPA signals
1=2 Z
2
^
jwnj
dn
1
jnj
and the ratio of x/x0 is the scale factor. The mother wavelet is assumed to be centered at time zero and to oscillate at frequency x0.
Essentially, Eq. (1) can be interpreted as a decomposition of the signal s(t0 ) into a family of shifted and dilated wavelets w[(x/
x0)(t0 t)]. The wavelet basis function w[(x/x0)(t0 t)] has variable width with consideration to x at each time t, and is wide for
small x and narrow for large x. By shifting x(t0 ) at xed parameter
x, the (x/x0)-scale mechanisms in the time response s(t0 ) can be
extracted and localized. Alternatively, by dilating x(t0 ) at a xed t,
all of the multiscale events of s(t0 ) at t can be analyzed according
to the scale parameter (x/x0).
In terms of frequency, low frequencies (high scales) correspond
to global information of a signal (that usually spans the entire signal), whereas high frequencies (low scales) correspond to detailed
information. In small scales, a temporally localized analysis is
done; as the scale increases, the breadth of the wavelet function increases, resulting in analysis with less time resolution but greater
frequency resolution. The wavelet functions are band-pass in nature, thus partitioning the frequency axis. In fact, a fundamental
property of wavelet functions is that c = Df/f where Df is a measure
of the bandwidth, f is the center frequency of the pass-band, and c
is a constant. The wavelet functions may therefore be viewed as a
bank of analysis lters with a constant relative pass-band.
6193
Normal (Neutral)
20
0.025 (Neutral)
100
15
10
50
0.08 (Neutral)
60
Normal (Erotic)
200
40
100
20
80
0.08 (Erotic)
0.025 (Erotic)
60
40
40
20
20
0
5
(Hz)
(Hz)
Fig. 5. Power spectrum density (V2/Hz) of VPA recorded in six classes (one specic subject).
qx;y
covx; y
rx ry
Ex lx y ly
rx ry
where E stands for expected value of the variable and cov stands for
covariance. As E(x) = lx, E(y) = ly and r2(x) = E(x2) E2(x),
r2(y) = E(y2) E2(y), qx,y can be dened as:
Exy ExEy
qx;y qq
Ex2 E2 x Ey2 E2 y
6194
1
0.5
1
0
-1
-0.5
-1
-2
50
50
-1
50
50
50
-1
-1
0
-1
-3
-3
50
50
-2
1.5
1
1
0.5
1.5
1
-0.5
-1
-1.5
50
-1
50
50
-1
-1.5
0.5
-0.5
5
5
5
0
0
-5
-5
-10
Normal (Neutral)
-5
0.025 (Neutral)
-5
5
0.08 (Neutral)
-5
Normal (Erotic)
0.025 (Erotic)
-5
0.08 (Erotic)
Fig. 7. One segmented VPA in a 960-points window recorded from 6 different classes (X-axis equals to 12 s).
X
f ; /r;j;k /r;j;k x:
function. Fig. 8 shows the decision-making ow chart to determine the most similar mother wavelet function towards
biosignals.
5. Steps 24 are repeated until all gathered data is analyzed.
fj x
/r;j;k x 2j=2 /r 2j k;
j; k 2 Z
dj x fj1 x fj x:
6195
Raw biosignals
(selected class)
324 mother
wavelet functions
Selecting a mother wavelet and one segmented signal from one class and
from one specific subject
AS= average of S in
segmented samples
EC Max in
class 1
EC Max in
class 2
EC Max in
class 3
EC Max in
class 4
EC Max in
class N
R1
1
wr xdx
R1
1
xr wr xdx 0.
Daubechies wavelets provide appropriate results in signal processing techniques due to the above-mentioned properties. A
wavelet function with compact support can be implemented easily
by nite length lters. Moreover, the compact support enables spatial domain localization. Since the wavelet basis functions have
continuous derivatives, they decompose a continuous function
more efciently while avoiding edge artifacts. Since the mother
wavelets are used to characterize details in a signal, they should
have a zero integral so that the trend information is stored in the
coefcients obtained by the father wavelet. A Daubechies wavelet
representation of a function is a linear combination of the wavelet
basis functions. Daubechies wavelet transforms are usually implemented numerically via quadratic mirror lters. Multiresolution
analysis of the trend and uctuation of a function is implemented
by convolving it with a low-pass lter and a high-pass lter that
are versions of the same wavelet.
As shown in biosignals, the signal with a sharp spike is properly
analyzed by Daubechies wavelets, because much less energy (or
trend) is stored in the high-pass bands. Hence, Daubechies wave-
6196
db36
db42
db37
db43
db38
db44
db39
db40
db45
db41
Forearm Pronation
db44
db44
db45
Wrist Flexion
Evaluation Criterion
db44
db44
db45
Wrist Abduction
db45
db44
Relax
db44
db45
db45
db44
db45
Forearm Supination
db45
Key Grip
db44
Chuck Grip
Spread Fingers
db45
However, in higher order, the difference of functions shape between two adjacent db functions is more distinct (see Fig. 9). In
Fig. 13, the trend of Daubechies family and EC was magnied for
6197
Channel 1
900
db44
db44
Channel 2
Evaluation Criterion
Evaluation Criterion
880
860
840
Forearm Pronation
5
10
15
20
25
30
35
40
45
660
640
x 10
Haar
db44
620
Channel 3
10
15
20
25
30
35
40
45
Fig. 13. Trend of Daubechies family vs. evaluation criterion in Intramuscular EMG
signals for two motions.
50
100
150
200
250
300
two motions
8000
db44
shan0.2-0.1
7000
x 10
db44
dmey
meyr
6000
fbsp1-0.2-0.1
fbsp2-0.2-0.1
fbsp2-0.1-0.1
db45
fbsp3-0.2-0.1
fbsp1-0.1-0.1
shan0.5-0.1
1.5
bior3.1
shan0.2-0.1
shan0.1-0.1
5000
4000
3000
2000
cmor4-0.1
shan1-0.4 fbsp3-0.2-0.9
cmor4-0.1
gaus1
cmor3-0.1
Haar
db45
cmor1-1.5
cgau1
1000
0.5
fbsp1-0.2-0.1
shan5-0.2
cmor1-0.1
Evaluation Criterion
fbsp3-0.1-0.1
Evaluation Criterion
shan0.5-0.1
cmor1-0.01
rbio3.1
fbsp3-0.2-0.1
fbsp2-0.2-0.1
fbsp1-0.2-0.2
fbsp3-0.1-0.1
rbio5-5
fbsp2-0.1-0.1
fbsp1-0.1-0.1
bior3-1
0
0
50
100
150
200
250
300
Fig. 14. Evaluation criterion (no unit) vs. mother wavelets for intramuscular EMG
signals recorded from one of the six channels of data acquisition system.
6198
(4,15)
Mother Wavelet: db44
(4,15)
Mother Wavelet: Morlet
40
1.5
30
1
20
0.5
10
0
-10
-0.5
-20
-1
-30
-1.5
-40
Fig. 15. CWC of a segmented surface EMG signal calculated using Morlet and Db44 in one specic scale. (Title: scale see Fig. 17).
(4,15)
Mother Wavelet: db44
(4,15)
Mother Wavelet: Morlet
1000
60
800
40
600
20
400
200
-20
-200
-40
-400
-60
-600
-80
-800
-1000
-100
Fig. 16. CWC of a segmented EEG signal calculated using Morlet and Db44 in one specic scale. (Title: scale see Fig. 17).
0,0
Raw Segmented Signal
Level 1
1,0
Level 2
2,0
Level 3
Level 4
1,1
3,0
4,0
4,1
2,1
3,1
4,2
4,3
3,2
4,4
2,2
3,3
4,5
4,6
4,7
3,4
4,8
2,3
3,5
4,9
3,6
3,7
Fig. 17. Decomposition tree and the level of decomposition (Raee et al., 2010).
6199
5. Conclusions
No.
Order
1
245
4650
51
52147
148
149
150
151200
201260
261267
268275
276290
291305
306324
Haar (db1)
Daubechies(db)
Coiet (coif)
Morlet (Morl)
Complex Morlet (cmor Fb-Fc)a
Discrete Meyer (dmey)
Meyer (meyr)
Mexican Hat (mexh)
Shannon (Shan Fb-Fc)a
Frequency B-Spline (fbsp M-Fb- Fc)a
Gaussian (gaus)
Complex Gaussian (cgau)
Biorthogonal (bior Nr.Nd)b
Reverse Biorthogonal (rbio Nr.Nd)b
Symlet (sym)
db 1
db 2db 45
coif 1coif 5
morl
Included Table
dmey
meyr
mexh
Included Table
Included Table
gaus 1gaus 7
cgau 1cgau 8
Included Table
Included Table
sym 2sym 20
1B
1B
1B
1B
1B
a
Fb is a bandwidth parameter, Fc is a wavelet center frequency, and M is an
integer order parameter.
b
Nr and Nd are orders: r for reconstruction/d for decomposition.
Table 1B
Studied wavelet families in detail (Raee et al., 2010).
No
Wave
No
Wave
No
Wave
No
Wave
No
Wave
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
11.5
11
10.5
10.3
10.2
10.1
10.05
10.02
10.01
20.1
20.2
20.3
20.4
20.5
20.6
20.7
20.8
20.9
21
21.1
21.2
21.3
21.4
21.5
21.6
21.8
21.9
22
22.1
22.2
22.3
22.4
22.5
22.6
22.7
22.8
22.9
23
30.1
30.2
30.3
30.4
30.5
30.6
30.7
30.8
30.9
31
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
31.1
31.2
31.3
31.4
31.5
31.6
31.8
31.9
32
32.1
32.2
32.3
32.4
32.5
32.6
32.7
32.8
32.9
33
40.1
40.2
40.3
40.4
40.5
40.6
40.7
40.8
40.9
41
41.1
41.2
41.3
41.4
41.5
41.6
41.8
41.9
42
42.1
42.2
42.3
42.4
42.5
42.6
42.7
42.8
42.9
43
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
dmey
meyr
mexh
0.10.1
0.10.2
0.10.3
0.10.4
0.10.5
0.10.6
0.10.7
0.10.8
0.10.9
0.11
0.20.1
0.20.2
0.20.3
0.20.4
0.20.5
0.20.6
0.20.7
0.20.8
0.20.9
0.21
0.50.1
0.50.2
0.50.3
0.50.4
0.50.5
0.50.6
0.50.7
0.50.8
0.50.9
0.51
10.1
10.2
10.3
10.4
10.5
10.6
10.7
10.8
10.9
11
20.1
20.2
20.3
20.4
20.5
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
20.6
20.7
20.8
20.9
11
10.10.1
10.10.2
10.10.3
10.10.4
10.10.5
10.10.6
10.10.7
10.10.8
10.10.9
10.11
20.10.1
20.10.2
20.10.3
20.10.4
20.10.5
20.10.6
20.10.7
20.10.8
20.10.9
20.11
30.10.1
30.10.2
30.10.3
30.10.4
30.10.5
30.10.6
30.10.7
30.10.8
30.10.9
30.11
10.20.1
10.20.2
10.20.3
10.20.4
10.20.5
10.20.6
10.20.7
10.20.8
10.20.9
10.21
20.20.1
20.20.2
20.20.3
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
20.20.4
20.20.5
20.20.6
20.20.7
20.20.8
20.20.9
20.21
30.20.1
30.20.2
30.20.3
30.20.4
30.20.5
30.20.6
30.20.7
30.20.8
30.20.9
30.21
1.1
1.3
1.5
2.2
2.4
2.6
2.8
3.1
3.3
3.5
3.7
3.9
4.4
5.5
6.8
1.1
1.3
1.5
2.2
2.4
2.6
2.8
3.1
3.3
3.5
3.7
3.9
4.4
5.5
6.8
6200
Table 2A
Wavelet families and their specications.
Property
Haar
Db
Coif
Morl
U
U
U
U
U
U
U
U
U
U
U
U
Cmor
Dmey
Meyr
Mexh
U
U
U
U
U
U
U
U
U
U
U
U
Table 2B
Wavelet families and their specications.
Property
Continuous wavelet transform
Discrete wavelet transform
Complex CWT
Compact supported orthogonal
Compact supported biorthogonal
Orthogonal analysis
Biorthogonal analysis
Symmetry
Near symmetry
Asymmetry
Explicit expression
Shan
Fbsp
Gaus
Cgau
U
U
Bior
Rbio
Sym
U
U
U
U
U
U
U
U
U
U
U
U
U
U
U
Acknowledgments
The authors are thankful to Professor Kevin Englehart, associate
director of the Institute of Biomedical Engineering at the University
of New Brunswick in Canada, for his supporting us with experimental EMG signals used in this research. The authors also
acknowledge funding support from the US DARPA (Award No.:
W81XWH-07-2-0078) for Idaho State University Smart Prosthetic
Hand Technology Phase I.
Appendix A
See Tables 1A2B.
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