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The term prodrug was first introduced by Albert in 1958. Generally, prodrugs can be utilized for
improving active drug solubility and bioavailability, increasing drug permeability and absorption,
modifying the distribution profile, preventing fast metabolism and excretion, and reducing toxicity.
Previously, the prodrug approach was a final resort during the drug discovery process only after all other
approaches had been exhausted. However, this strategy is now considered during the early stages of the
drug development process. Most antitubercular agents are defined as prodrugs, including isoniazid and
ethionamide. Thus, the prodrug approach could provide novel targets for the rational design of more
effective treatments for tuberculosis (TB).
their therapeutic action and Type IB, by metabolic tissues), whereas From old to new prodrugs against TB
Type II prodrugs are metabolized extracellularly (Type IIA, in the To specifically hit a single target with high affinity, an ideal
milieu of the gastrointestinal fluid; Type IIB, in the circulatory antitubercular agent should be neither reactive nor too small.
system and/or other extracellular fluid compartments; and Type Nonetheless, many of the key antitubercular drugs are called
IIC, near or inside therapeutic target/cells) [5]. Antimycobacterial reactive dirty fragments [18]. INH, PZA, and ETH are reactive
prodrugs can be further divided in two main groups depending on small molecules that exert their antibacterial effects on different
their mechanism of activation: mycobacterial bioactivated and host targets upon bioactivation [18]. It is by investigating the mecha-
bioactivated. nisms of action of these compounds and those of their activators
Reviews POST SCREEN
Interestingly, among currently available first- and second-line that it is possible to discover new drug targets.
agents, INH, PZA, and ethionamide (ETH) are prodrugs that exert
their effects via mycobacterial metabolic activation [2]. Among Mycobacterial bioactivated prodrugs
these prodrugs, PZA is the most unconventional, being primarily para-Aminosalicylic acid
active against nongrowing persisters [9]. PZA enters bacilli through para-Aminosalicylic acid (PAS) entered clinical practice as a bac-
passive diffusion and is converted to its active form, pyrazinoic teriostatic agent used in combination with streptomycin (STR) and
acid (POA), by pyrazinamidase (PZase)/nicotinamidase [911]. INH [19]. However, because of adverse gastrointestinal effects
INH is used in combination with PZA during the first 2 months associated with PAS treatment, it was replaced with the better-
of TB therapy and is activated by KatG, a multifunctional catalase tolerated ethambutol (EMB) [20]. Although widely used for over 60
peroxidase that activates INH by peroxidation, resulting in active years, the mechanism of action of PAS remained elusive; only
intracellular INH-derived damaging species [12]. ETH is structur- recently was it demonstrated that PAS is a prodrug activated by the
ally similar to INH, and S-oxygenation of the ETH thiourea moiety mycobacterial folate pathway, generating a hydroxyl dihydrofo-
is involved in the bioactivation of a hepatotoxic metabolite known late antimetabolite that inhibits the enzymatic activity of dihy-
to retain full activity against TB [2,13,14]. ETH oxidation is medi- drofolate reductase (DHFR) [18,21,22].
ated by EthA, a monooxygenase that induces ETH sensitivity when This evidence underlined the usefulness for drug development
overexpressed in mycobacteria [13,14]. The principal positive of exploiting the intracellular enzyme catalysis of compounds [21].
aspects of the mycobacterial bioactivated prodrug include in- Thanks to improved formulations of PAS and because of the global
creased bioavailability and solubility, and decreased toxicity. spread of MDR and XDR M. tuberculosis strains, PAS has recently re-
The main benefits of host-bioactivated drugs include: increased entered antitubercular drug regimens as second-line agent [23].
bioavailability and therapeutic effectiveness; improved solubility, Recently, a M. tuberculosis strain with a mutation in Rv2671
chemical stability, and organoleptic properties; ameliorated ab- [encoding the 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidine-
sorption; increased organ/tissue-selective delivery of the active dione 50 -phosphate (AROPP) reductase (RibD)] was found to be
agent; and decreased toxicity [15,16]. Such characteristics are resistant to DHFR inhibitors, including PAS [24]. These advances in
useful for optimizing the absorption, distribution, metabolism, our understanding of the mechanism of action of PAS will enable
excretion, and unwanted toxicity (so-called ADMET properties) the development of novel strategies to revitalize this agent for use
of the active drug [15,16]. in TB therapy [2325].
By contrast, the main limitations of both prodrug groups relate Antituberculars activated by EthA: ethionamide,
to possible toxicity resulting from the production of unexpected thiacetazone, isoxyl, 7947882, and 7904688
metabolites after bioactivation [16]. For instance, INH, ETH, and Among the recognized drug activators, EthA is likely to metabolize
other prodrugs activated by EthA (e.g., isoxyl and thiacetazone) the widest range of compounds. This enzyme, even though de-
can be further metabolized by the host, resulting in hepatotoxicity fined as a Baeyer Villiger monooxygenase, has broad substrate
[17]. specificity, being able to oxidize different thiocarbamide com-
However, the main problem related to the use of mycobacte- pounds [14,26]. EthA activates several compounds, which in turn
rial bioactivated prodrugs is the emergence of strains resistant to target different mycobacterial enzymes through mechanisms of
prodrugs because of mutations in the gene encoding the activa- action that, in some cases, are still not clearly defined (Fig. 1). A
tor. This is the case for INH and ETH [13]. The main mechanisms deeper investigation of these compounds could lead to new infor-
of resistance to these two drugs are mutations in the genes katG mation and to the identification of new potential drug targets. It is
and ethA, which prevent the formation of the INH-NAD or ETH- well known that EthA converts ETH or prothionamide (PTH) via
NAD adducts. For example, the KatG(S315T) mutation is found oxidation to an imidoyl radical, forming a NAD-adduct that
in up to 94% of INH-resistant M. tuberculosis clinical isolates [13]. inhibits the cellular target InhA (Fig. 1) [26]. In addition, thiace-
This problem is still unresolved, despite the fact that INH is tazone (TAC) and isoxyl (ISO) are both prodrugs activated by EthA
currently the most commonly used antitubercular drug. In ad- and their mechanisms of action were recently characterized
dition, the issue of drug resistance could also occur in cases in [27,28]. These thioamides, initially used as second-line drugs, were
which (myco)bacterial bioactivation is expected, particularly if recently retracted because of their serious adverse effects and their
the gene encoding the activator is not essential for bacterial high frequency of drug-resistant mutants [28]. EthA oxidizes these
growth. compounds to sulfenic acid forms, which covalently react with a
In terms of the emergence of new drugs required to fight TB, cysteine residue of the HadA subunit of the FAS II b-hydroxyacyl
many of the current anti-tubercular drug candidates currently in ACP dehydratase complex, thus inhibiting the dehydration step of
preclinical trials are prodrugs. Thus, it is timely to discuss their the type II fatty acid synthase pathway (Fig. 1) [28]. It is likely that
possible use in modern pharmacotherapy. EthA activates the Perchlozone1 analog of TAC, approved for
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Drug Discovery Today Volume 22, Number 3 March 2017 REVIEWS
N
InhA
NH
O H 7947882
N N
ADPR NH2 S NO2
O
ETH NAD+
N
H
ISO H H
N N
S O
O
O TAC
HN
HN SH
N NH
O
HN
HN S
N NH S
Cys61 HadA
H H
N N
S
O S O
Cys61
HadA
Drug Discovery Today
FIGURE 1
The main mechanisms of EthA-mediated compound activation. The monooxygenase activates several thiol-containing compounds, which exert their toxic effects
through different targets and different mechanisms of action. Once activated, ethionamide (ETH) forms a covalent adduct with NAD+, which inhibits InhA.
Conversely, thiacetazone (TAC) and isoxyl (ISO) form covalent adducts with their target HadA upon activation, whereas thiophenecarboxamides act through
noncovalent inhibition of the CTP synthetase PyrG following EthA oxidation.
TABLE 1
Main prodrugs under development.
Compound Stage of development Mechanism of activation Refs
PA-824 (pretomanid) Phases II and III of clinical trial Ddn nitroreductase [31]a
Delamanid Phases III of clinical trial Ddn nitroreductase [35,36]a
PBTZ169 Last phase of preclinical trial DprE1 (target itself ) [3739]a
Lansoprazole Host bioactivation [43]
Thienopyrimidine TP053 Rv2466c [41,42]
Thiophenecarboxamide 7947882 EthA [30]
Carbamothioylcarboxamide 7904688 EthA [30]
a
http://www.newtbdrugs.org.
therapy for MDR-TB in Russia in 2012, with the same mechanism 7904688, were recently identified via phenotypic screening [30]
used for the activation of TAC and ISO [29]. (Table 1). The involvement of EthA in the activation of these
Two new further compounds activated by EthA, the thiophe- compounds was first suggested by genetic analysis of M. tuberculo-
necarboxamide 7947882 and the carbamothioylcarboxamide sis spontaneous resistant mutants and then demonstrated by
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REVIEWS Drug Discovery Today Volume 22, Number 3 March 2017
biochemical studies, leading to the validation of a new cellular benzothiazinone PBTZ169 are currently in clinical trials (http://
target, the CTP synthetase PyrG. However, the precise mechanism www.newtbdrugs.org; Table 1). The dihydro-nitroimidazooxazole
of action of these compounds has been only partially defined. It derivative delamanid received conditional approval by the Euro-
has been demonstrated that, for both compounds, EthA activation pean Medicines Agency (EMA) for the treatment of MDR-TB in
occurs through oxidation of the sulfur atom. However, the active November 2013.
metabolite was identified only for 7947882 (Fig. 1), whereas, for Nitro compounds are usually activated in M. tuberculosis
7904688, only an inactive end-product was isolated, leading to the through different enzymatic reactions, thus leading to different
hypothesis that the real active metabolite could be a highly reac- mechanisms of action (Fig. 2). For instance, the bicyclic 4-nitroi-
Reviews POST SCREEN
tive intermediate [30]. Thus, the possibility that these activated midazoles PA-824 and delamanid are prodrugs activated by Ddn, a
compounds hit additional targets, probably by forming covalent deazaflavin-dependent nitroreductase [35] (Table 1). The reactive
adducts, cannot be excluded. intermediates, formed during the conversion to the main desnitro-
Nitro compounds: PA-824, delamanid, PBTZ169, and metabolites, are considered to have a vital role in the inhibition of
TP53 methoxy mycolic acid and ketomycolic acid production in repli-
Similarly to the reactive dirty fragment, nitro group-containing cating bacilli [36], while the generation of reactive nitrogen species
compounds are usually not a preferred choice for drug discovery. is the main cause of the anaerobic activity of the compounds
However, despite their potential mutagenic effects, several have (Fig. 2) [31,35].
been demonstrated to be promising drug candidates [3134]. Compared with nitroimidazoles, benzothiazinones (BTZs)
Compounds such as the nitroimidazoles and the benzothiazi- [37,38] are suicide inhibitors of the decaprenylphosphoryl-b-D-
nones showed great potential against M. tuberculosis infections, ribose oxidoreductase DprE1, an essential enzyme involved in cell
such that two nitroimidazoles (PA-824 and delamanid) and the wall biosynthesis. To fulfill their antitubercular activity, the nitro
N OH uce
d Toxic effects
Red 466c O2N
O
Rv2 S
SH
Respiratory SH N
poisoning
N N
Nitroimidazoles H
DprE1-Cys387
FAD SH
DprE1-Cys387
R
DP
FADH2 SH
X
O
DP
Benzothiazinones F3C
N
O S N
F3C +N O
N O
O O
S N O
O
N F3C
N
FAD S OH O
S N
O
DprE1-Cys387 N
FAD SH O O
DprE1-Cys387
Drug Discovery Today
FIGURE 2
Mechanisms of activation and action of nitro compounds. Ddn activates nitroimidazoles, which could exert their antitubercular activity against replicating and
nonreplicating bacilli through different intermediate metabolites of the reaction. Similarly, Rv2466c activates the nitrothiophenes, probably releasing toxic
intermediates. Conversely, the mechanism of benzothiazinone (BTZ) activation is very different; once oxidized by the target itself (DprE1), these compounds, being
522 www.drugdiscoverytoday.com
suicide inhibitors, bind the enzyme active site, covalently blocking its activity.
Drug Discovery Today Volume 22, Number 3 March 2017 REVIEWS
group of BTZs is enzymatically activated by the target itself [38]. New strategies for TB prodrugs
DprE1 reduces the nitro group of the BTZs to nitroso to reoxidize The beginning of 21st century has been a time of real progress in
its flavin cofactor during the catalytic cycle, and the activated the uses of the prodrug approach for drug development. Many
moiety can readily react with a cysteine of the active site of the published journal articles, reviews, and patents describe the effec-
enzyme, irreversibly blocking its activity (Fig. 2) [9]. PBTZ169 is the tiveness of prodrugs that are currently undergoing clinical trials
most suitable BTZ derivative for clinical development [39] (Table 1), (reviewed in [8]).
being less cytotoxic than the hit BTZ, and showing better efficacy at The prodrug strategy is one of the most promising approaches to
lower concentrations in a TB murine model. Moreover, PBTZ169 enhance the therapeutic efficacy of pharmacologically active
was less susceptible to inactivation by Mycobacterium smegmatis agents by optimizing the ADMET properties of the parent drugs
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REVIEWS Drug Discovery Today Volume 22, Number 3 March 2017
MXF, especially against MDR- and XDR-TB. Thus, these results EthA-activated compounds, such as the thiophenecarboxamide
together suggest that further development of pVXc-486 is war- 7947882 (M.R. Pasca, unpublished, 2016).
ranted [48].
Concluding remarks
An ester prodrug approach: salycil-AMS Prodrugs are used to overcome pharmacokinetic and pharmaceu-
In addition to poor solubility, several antitubercular agents are tical barriers to increase drug biological bioavailability, to deliver
characterized by poor bioavailability, mainly because of their the drug to a specific site in the body, to prolong drug action, to
low lipophilicity, which prevents their diffusion across the my- minimize toxicity, and to protect the drug from presystemic
cobacterial cell wall. This is the case for the [50 -O-(N-salicylsul-
Reviews POST SCREEN
metabolism [49].
famoyl)adenosine] (salycil-AMS) compound, a potent inhibitor Several antitubercular compounds, such as PZA, INH and ETH,
of the MbtA enzyme involved in siderophore biosynthesis are bioprecursor prodrugs that require activation by M. tuberculosis
[50,51], and for the acyclic nucleoside phosphonate inhibitors enzymes to acquire bacterial toxicity. Other antitubercular agents,
(ANPs) of hypoxanthine-guanine phosphoribosyltransferase, a such as LSP or PZA, undergo host-mediated bioactivation instead.
key enzyme of the purine salvage pathway [52]. Among the The major problem with these prodrugs is the difficulty in pre-
chemical bonds used to link the parental drug and carrier, esters dicting their bioconversion rates and, thus, their pharmacological
have proven to be promising because of their amenability to or toxicological effects.
hydrolysis both in vivo and in vitro [47]. The synthesis and Different strategies have been proposed to overcome problems
evaluation of a series of lipophilic ester prodrugs of salycil- such as poor patient compliance, lack of solubility, and poor
AMS led to a lower than expected improvement of its oral bioavailability. A phosphate prodrug approach has been used for
bioavailability [51]. In this case, this approach was unsuccessful, enhancing the solubility of the VXc-486 drug. This strategy gave rise
but provided useful information for further studies [51]. Pro- to the pVXc-486 prodrug, characterized by a better in vivo efficacy
drugs of ANPs also showed good antitubercular activity and against M. tuberculosis than the parental drug VXc-486. Membrane
minimal cytotoxicity [52]. Thus, these first attempts provide permeability has a significant effect on drug efficacy and here the
some evidence for the use of this prodrug strategy in drug prodrug strategy can be a valuable option for improving poorly
development. permeable drugs [49]. For lipophilic ester prodrugs of the salycil-
AMS compound, the prodrug approach was unsuccessful, but did
ETH boosters provide a useful benchmark to guide future studies. By contrast,
A well-characterized mechanism of mycobacterial bioactivation ETH boosters have been synthesized and utilized to successfully
could help to develop new methods to improve prodrug efficacy, improve the activity of EthA-activated compounds [53,54].
for example by increasing the rate of bioactivation. This is the case Overall, outstanding progress has been made in the field of TB
for ETH boosters. In fact, the expression of the ETH activator EthA prodrug design; however, more studies are needed to offer a
is under the control of the EthR transcriptional repressor, which winning alternative to improve TB drug ADMET properties with-
then contributes to intrinsic ETH low activity. Recently, it was out losing the benefits of the drug molecule itself.
demonstrated that EthR is a valuable target for boosting ETH
bioactivation, because small molecules were found to bind the Acknowledgments
repressor, inhibiting its DNA-binding ability and, thus, abolish- This work was supported by European Communitys Seventh
ing its function and increasing ETH activity [53,54]. Moreover, Framework Program (Grant 260872) and by the University of
some ETH boosters are also able to increase the activity of other Pavia, Italy (UniversitiamoTubercolosis: a re-emergent killer).
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