tmp4B20 TMP

2017 (upto March)
1. Rajeev K Varshney, Rachit K Saxena, Hari D Upadhyaya, Aamir W Khan, Obarley

Yu, Changhoon Kim, Abhishek Rathore, Dong Seon, Jihun Kim, Shaun An, Vinay
Kumar, G Anuradha, K. Yamini, Wei Zhang, S Muniswamy, Bellbull Kim, R Varma
Penmetsa, Eric von Wettberg, Swapan K Datta. 2017. Whole genome re-
sequencing of 292 pigeonpea accessions identifies genomic regions associated
with domestication and agronomic traits. Nature Genetics.
2. Manish K. Pandey, Gaurav Agarwal, Sandip M. Kale, Josh Clevenger, Spurthi N.
Nayak, Manda Sriswathi, Annapurna Chitikineni, Carolina Chavarro, Xiaoping
Chen, H. D. Upadhyaya, Manish K. Vishwakarma, Soraya Leal-Bertioli, Xuanqiang
Liang, David J.Bertioli, Baozhu Guo, Scott A. Jackson, Peggy Ozias-Akins, Rajeev
K. Varshney. 2017. Development and Evaluation of a High Density Genotyping
Axiom_Arachis Array with 58K SNPs for Accelerating Genetics and Breeding in
Groundnut. Scientific Reports 7:40577. DOI: 10.1038/srep40577
3. Purushothaman R, Krishnamurthy L, H D. Upadhyaya, Vincent Vadez, Rajeev K.
Varshney. 2017. Root traits confer grain yield advantages under terminal drought in
chickpea (Cicer arietinum L.). Field Crops Research Pages 146161
http://dx.doi.org/10.1016/j.fcr.2016.11.004
4. Shivali Sharma, Manish K. Pandey, Hari K. Sudini, H. D. Upadhyaya, and Rajeev
K. Varshney. Harnessing Genetic Diversity of Wild Arachis, Species for Genetic
Enhancementof Cultivated Peanut. Published in Crop Sci. 57:111 (2017).
doi: 10.2135/cropsci2016.10.0871
5. Upadhyaya, H.D., KN Reddy, SK Pattanashetti, Vinod Kumar and Senthil
Ramachandran 2017. Identification of promising sources for fodder traits in the world
collection of pearl millet at the ICRISAT genebank. Plant Genetic Resources.
2016
6. Cuevas, H., Z. Chengbo, T. Haibao, K. Prashant, D. Sayan, Lin Yann, Ge,

Zhengxiang, C.T. Hash, H.D.Upadhyaya and H. Andrew Paterson. 2016. The
evolution of photoperiod-insensitive flowering in sorghum, a genomic model for
panicoid grasses. Mol. Biol. Evol. doi: 10.1093/molbev/msw120
7. Chen, X., H. Li, M.K. Pandey, Q. Yang, X. Wang, V. Garg, H. Li, X. Chi, D.
Doddamani, Y. Hong, H.D. Upadhyaya, H. Guo, A.W. Khan, F. Zhu, X. Zhang, L.
Pan, G.J. Pierce, G. Zhou, K.A.V.S. Krishnamohan, M. Chen, N. Zhong, G.
Agarwal, S. Li, A.C., G. Zhang, S. Sharma, N. Chen, H. Liu, P. Janila, S. Li, M.
Wang, T. Wang, J. Sun, X. Li, C. Li, M. Wang, L. Yu, S. Wen, S. Singh, Z. Yang,
J. Zhao, C. Zhang, Y. Yu, J. Bi, X. Zhang, Z. Liu, A.H. Paterson, S. Wang, X.
Liang, R.K. Varshney, and S. Yu. 2016. Draft genome of the peanut A-genome
progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis
and allergens. Proc. Natl. Acad. Sci. www.pnas.org/cgi/doi/10.1073/pnas.1600899113
(Kujur, A., H.D. Upadhyaya, D. Bajaj, C.L.L. Gowda, S. Sharma, A.K. Tyagi, and
S.K. Parida. 2016. Identification of candidate genes and natural allelic variants for
QTL s governing plant height in chickpea. Scientific Reports. 6:27968 | DOI:
10.1038/srep27968.
8. Upadhyaya, H.D, D. Bajaj, S. Das, V. Kumar, C.L.L. Gowda, S. Sharma, and S.K.
Parida. 2016. Genetic dissection of seed-iron and zinc concentrations in chickpea.
Scientific Reports. 6:24050.DOI: 10.1038/srep24050
9. Upadhyaya, H.D., D. Bajaj, N. Laxmi , S. Das, V. Kumar, C.L.L Gowda, S. Sharma,
A. Tyagi, and S.K. Parida. 2016. Genome-wide scans for delineation of candidate
genes regulating seed-protein content in chickpea. Frontiers in Plant Science.
doi:10.3389/fpls.2016.00302
10. Bajaj, D., R. Srivastava, M. Nath, S Tripathi, C. Bharadwaj, H.D. Upadhyaya, A.K.
Tyagi and S.K. Parida.2016. EcoTILLING-based association mapping efficiently
delineates functionally relevant natural allelic variants of candidate genes governing
agronomic traits in chickpea Frontiers in Plant Science. 7: 450. doi:
10.3389/fpls.2016.00450
11. Srivastava R, D Bajaj, K Yogesh Sayal, Prabina K. Meher, H. D. Upadhyaya,
Rajendra Kumar, S Tripathi, C Bharadwaj, A R. Rao, S K. Parida. 2016. Genome-
wide development and deployment of informative intron-spanning and intron-length
polymorphism markers for genomics-assisted breeding applications in chickpea.
Plant Science. http://dx.doi.org/10.1016/j.plantsci.2016.08.013
12. Bajaj, D., H.D. Upadhyaya, S. Das, V. Kumar, C.L.L. Gowda, S. Sharma, A.K.
Tyagi, and S.K. Parida. 2016. Identification of candidate genes for dissecting
complex branch number trait in chickpea. Plant Science. 245:6170.
doi:10.1016/j.plantsci.2016.01.004
13. Upadhyaya, H.D., K.N. Reddy, M. Vetriventhan, Gumma Murali Krishna, M. I.
Ahmed, M. T. Reddy and S. K. Singh. 2016. Status, genetic diversity and gaps in
sorghum germplasm from South Asia conserved at ICRISAT genebank. Plant
Genetic Resources- Characterization and Utilization.
doi:10.1017/S147926211600023X
14. Krishnamurthy L., Ramamoorthy P, H. D. Upadhyaya, Vincent Vadez, Rajeev K
Varshney.2016. Shoot traits and their relevance in terminal drought tolerance of
chickpea (Cicer arietinum L.) doi:10.1016/j.fcr.2016.07.016. Field Crops Research
197 (2016) 1027.
15. Ramamoorthy P., L Krishnamurthy, H. D. Upadhyaya, Vincent Vadez, Rajeev K.
Varshney. 2016. Genotypic Variation in Soil Water Use and Root Distribution and
their Implications for Drought Tolerance in Chickpea. Functional Plant
Biology 44(2) 235-252/http://dx.doi.org/10.1071/FP16154
16. Yol, E, H. D. Upadhyaya, Bulent Uzun. 2016. Identification of rust resistance in
groundnut by using validated SSR marker. Euphytica (2016) 210: 405.
doi:10.1007/s10681-016-1705-3/
17. Upadhyaya H. D., Sangam L. Dwivedi, Mani Vetriventhan, L. Krishnamurthy, and
Shailesh Kumar Singh. Post-Flowering Drought Tolerance Using Managed Stress
Trials, Adjustment to Flowering, and Mini Core Collection in Sorghum. Crop Science.
57:112 (2017). doi: 10.2135/cropsci2016.04.0280
18. Upadhyaya, H.D., Y-H. Wang, D.V.S.S.R. Sastry, S.L. Dwivedi, P.V. Vara Prasad,
A. M. Burrell, R.R. Klein, G.P. Morris, and P.E. Klein. 2016. Association mapping of
germinability and seedling vigor in sorghum under controlled low temperature
conditions. Genome 59: 137-145.
19. Upadhyaya, H.D., 2016. Germplasm Management for Enhanced Genetic Gains.
Indian Journal of Plant Genetic Resources. 29(3):261-264. DOI : 10.5958/0976-
1926.2016.00041.3
20. Upadhyaya H. D, KN Reddy, M Irshad Ahmed, Vinod kumar, G Murali Krishna and
Senthil Ramachandran. Geographical distribution of traits and diversity in the world
collection of pearl millet [Pennisetum glaucum (L.) R. Br. Synonym: Cenchrus
americanus (L.) Morrone.] land races conserved at the ICRISAT genebank.2016.
Genetic Resources and Crop Evolution.
21. Katoch Omika , Chauhan U.S., Yadav Renu, Yadav S.S Kumar Ashwani , Yadav
Ashwani Yadav Neelam, H. D. Upadhyaya and Kumar Rajendra. Nitrate Reductase
based phylogenetic analysis in chickpea. 2016. Research Journal of Chemical and
Environment
22. Upadhyaya, H.D., Reddy KN, Senthil Ramachandran, Vinod Kumar and Irshad
Ahmed M. 2016. Adaptation pattern and genetic potential of Indian pearl millet named
landraces conserved at the ICRISAT genebank. Indian Journal of Plant Genetic
Resource. 29(2): 1-17 DOI 10.5958/0976
23. Saha, D., R.S. Rana, L. Arya, M. Verma, M.V.C. Gowda, and H.D. Upadhyaya.
2016. Genetic polymorphism among and between blast disease resistant and
susceptible finger millet (Eleusine coracana L. (Gaertn.) Plant Genetic Resources:
doi:10.1017/S1479262116000010
24. Shivali Sharma, H. D. Upadhyaya. Interspecific hybridization to introduce useful
genetic variability for pigeonpea improvement.2016. Indian Journal of Genetics Plant
Breeding. http://dx.doi.org/10.5958/0975-6906.2016.00067.5
25. Waliyar, F., K. V. K. Kumar, M. Diallo, A. Traore, U.N. Mangala, H.D. Upadhyaya,
and H. Sudini. 2016. Resistance to pre-harvest aflatoxin contamination in ICRISATs
groundnut mini core collection. European Journal of Plant Pathology.
doi:10.1007/s10658-016-0879-9
26. Krishnamurthy, L., H.D. Upadhyaya, J. Kashiwagi, R. Purushothaman, S.L.
Dwivedi, and V. Vadez. 2016. Variation in drought-tolerance components and their
interrelationships in the minicore collection of fingermillet germplasm.Crop
Science.DOI:10.2135 /cropsci2016.03.019
27. Lakshmanan Krishnamurthy, H.D. Upadhyaya, Junichi Kashiwagi, Ramamoorthy
Purushothaman, Sangam Lal Dwivedi, and Vincent Vadez. 2016. Variation in
drought-tolerance components and their interrelationships in the core collection of
foxtail millet (Setaria italica) germplasm.n Crop and Pasture Science 67(8):834
DOI: 10.1071/CP15338 http://dx.doi.org/10.1071/CP15338
28. Upadhyaya, H.D., K.N. Reddy, M.I. Ahmad, S. Ramchandran, V. Kumar, and S.
Singh. 2016. Characterization and genetic potential of African pearl millet named
landraces conserved at the ICRISAT Genebank. Plant Genetic Resources.
doi:10.1017/S1479262116000113
2015
29. Kujur, A., H.D.Upadhyaya T. Shree, D. Bajaj, S. Das, M.S. Saxena, S. Badoni, V.
Kumar, S. Tripathi, C.L.L. Gowda S. Sharma, S. Singh, A. K. Tyagi and S.K. Parida.
2015. Ultra-high density intra-specific genetic linkage maps accelerate identification
of functionally relevant molecular tags governing important agronomic traits in
chickpea. Scientific Reports. 5:9468. doi: 10.1038/srep09468
30. Bajaj, D., H.D. Upadhyaya, Y. Khan, S. Das, S. Badoni, T. Shree, V. Kumar, S.
Tripathi, C.L.L. Gowda, S. Singh, S. Sharma, A. Tyagi, D. Chattopadhyay, and S.
Parida. 2015. A combinatorial approach of comprehensive QTL-based comparative
genome mapping and transcript profiling identified a seed weight-regulating
candidate gene in chickpea. Nat. Scientific Rep. 5:9264. DOI: 10.1038/srep09264.
31. Das S., H.D. Upadhyaya, R. Srivastava, D. Bajaj, C.L.L. Gowda, S. Sharma, and S.
Singh, A.K. Tyagi, and S.K. Parida. 2015b. Genome-wide insertion-deletion (InDel)
marker discovery and genotyping for genomics-assisted breeding applications in
chickpea: DNA Research. doi: 10.1093/dnares/dsv020
32. Kujur, A., D. Bajaj, H.D. Upadhyaya, S. Das, R. Ranjan, T. Shree, M. Saxena, S.
Badoni, V. Kumar, S. Tripathi, C.L.L. Gowda, S. Sharma, S. Singh, A. Tyagi, and S.
Parida. 2015. A genome-wide SNP scan accelerates trait-regulatory genomic loci
identification in chickpea. Scientific. Reports 5:11166 doi: 10.1038/srep11166
33. Das, S., H.D. Upadhyaya, D. Bajaj, A. Kujur, S. Badoni, L. Laxmi, V. Kumar, S.
Tripathi, C.L.L. Gowda, S. Sharma, S. Singh, A.K. Tyagi, and S.K. Parida. 2015.
Deploying QTL-seq for rapid delineation of a potential candidate gene underlying
major trait-associated QTL in chickpea. DNA Res. doi:10.1093/dnares/dsv004
34. Kujur, A., D. Bajaj, H.D. Upadhyaya, S. Das, R. Ranjan, T. Shree, M.S. Saxena, S.
Badoni, V. Kumar, S. Tripathi, C.L.L. Gowda, S. Sharma, S. Singh, A.K. Tyagi, and
S.K. Parida. 2015. Employing genome-wide SNP discovery and genotyping strategy
to extrapolate the natural allelic diversity and domestication patterns in chickpea.
Frontiers in Plant Science. 6: doi: 10.3389/fpls.2015.00162
35. Bajaj, D., S. Das, HD. Upadhyaya, R. Ranjan, S. Badoni, V. Kumar, S. Tripathi,
C.L.L. Gowda, S. Sharma, S. Singh, A. Tyagi, and S.K. Parida. 2015. A
genome-wide combinatorial strategy dissects complex genetic architecture of seed
coat color in chickpea. Frontiers in Plant Science. 6:979.
Doi:10.3389/fpls.2015.00979
36. Bajaj, D., M.S. Saxena, A. Kujur, S. Das, S. Badoni, S. Tripathi, H.D. Upadhyaya,
C.L.L. Gowda, S. Sharma, S. Singh, A. K. Tyagi and S.K. Parida. 2015. Genome-
wide conserved non-coding microsatellite (CNMS) marker-based integrative
genetical genomics for quantitative dissection of seed weight in chickpea. J. Exp.
Bot. 66: pp. 12711290. doi:10.1093/jxb/eru478
37. Upadhyaya, H.D., D. Bajaj, S. Das, M.S. Saxena, S. Badoni, V. Kumar, S. Tripathi,
C.L.L Gowda, S. Sharma, A.K. Tyagi, and S.K. Parida. 2015. A genome-scale
integrated approach aids in genetic dissection of complex flowering time trait in
chickpea. Plant Mol. Biol. 89:403-420. doi:10.1007/s11103-015-0377-z
(Impact Factor 3.762, Cited 6)
38. Khoury, C.K., N.P. Castaeda-Alvarez, H.A. Achicanoy, C.C. Sosa, V. Bernau, M.T.
Kassa, S.L. Norton, L.J.G. van der Maesen, H.D. Upadhyaya, J. Ramrez-Villegas,
A. Jarvis, and P.C. Struik. 2015. Crop wild relatives of pigeonpea [Cajanus cajan (L.)
Millsp.]: distributions, ex situ conservation status, and potential genetic resources for
adaptation to abiotic stress. Biol. Conserv. 184:259270.
39. Wallace, J.G., H.D. Upadhyaya, M. Vetriventhan, E.S. Buckler, C.T. Hash, and P.
Ramu. 2015. The genetic makeup of a global barnyard millet germplasm collection.
The Plant Genome. doi:10.3835/plantgenome2014.10.0067
40. Upadhyaya, H.D., M. Vetriventhan, S. P. Deshpande, S. Sivasubramani, J.G.
Wallace, E. S. Buckler, C.T. Hash, and P. Ramu. 2015. Population genetics and
structure of a global foxtail millet germplasm collection. The Plant Genome. doi:
10.3835/plantgenome2015.07.0054
41. Purushothaman, R., M. Thudi, L. Krishnamurthy, H.D. Upadhyaya, J. Kashiwagi,
C.L.L. Gowda, and R.K. Varshney. 2015. Association of mid-reproductive stage
canopy temperature depression with the molecular markers and grain yields of
chickpea (Cicer arietinum L.) germplasm under terminal drought. Field Crops
Research. 174:111.
42. Kiran Babu, T., R. Sharma, R.P. Thakur, H.D. Upadhyaya, P.N. Reddy, and A.G.
Girish. 2015. Selection of host differentials for elucidating pathogenic variation in
Magnaporthe grisea populations adapted to finger millet [Eleusine coracana (L.)
Gaertn.] Plant Disease. doi: http://dx.doi.org/10.1094/PDIS-10-14-1089-RE
43. Engin Yol, H.D. Upadhyaya and Bulent Uzun 2015. Molecular diagnosis to identify
new sources of resistance to sclerotinia blight in groundnut (Arachis hypogaea L.).
Euphytica 203:367374.
44. Upadhyaya, H.D., S.L. Dwivedi, S. Singh, K.L. Sahrawat, and S.K. Singh. 2015.
Genetic variation and post-flowering drought effects on seed iron and zinc in
ICRISAT sorghum mini core collection. Crop Science 56:374384.
doi:10.2135/cropsci2015.05.0308.
45. Sudini, H., H.D. Upadhyaya, S.V. Reddy, U.N. Mangala, A. Rathore, and K.V.K.
Kumar. 2015. Resistance to late leaf spot and rust diseases in ICRISAT's mini core
collection of peanut (Arachis hypogaea L.) Austr. Plant Pathol .44: 557-566. ISSN
0815-3191 doi:10.1007/s13313-015-0368-1
46. Sharma, S. and H.D. Upadhyaya. 2015. Vernalization and photoperiod response in
annual wild Cicer Species and cultivated chickpea. Crop Science 55:23932400
doi:10.2135/cropsci2014.09.0598
47. Lalitha, N., H.D. Upadhyaya, L. Krishnamurthy, J. Kashiwagi, P.B. Kavikishor, and
S Singh. 2015. Assessing genetic variability for root traits and identification of trait
specific germplasm in chickpea (Cicer arietinum L.) reference set. Crop Science
.55(5): 2034-2045 doi: 10.2135/cropsci2014.12.0847
48. Sharma, R., H.D. Upadhyaya, S. Sharma, V.L. Gate, and C. Raj. 2015. New
sources of resistance to multiple pathotypes of Sclerospora graminicola in the pearl
millet mini core germplasm collection. Crop Science 55:1619-1628. doi:
10.2135/cropsci2014.12.0822
49. Grace D, G. Mahuku, V. Hoffmann, C. Atherstone, H.D. Upadhyaya and R.
Bandyopadhyay. 2015. International agricultural research to reduce food risks: Case
studies on aflatoxins Food Sec. J. 7:569582.
50. Rai, K.N., G. Velu, M. Govindaraj, H.D. Upadhyaya, A.S. Rao, H. Shivade, and K.N.
Reddy. 2015. Iniadi pearl millet germplasm as a valuable genetic resource for high
grain iron and zinc densities. Plant Genetic Resources: Characterization and
Utilization 13(1): 75-82.
51. Upadhyaya, H.D., K.N. Reddy, S. Ramachandran, V. Kumar, S. Singh, M.T. Reddy,
and M.I. Ahmed. 2015. Status and diversity in the pigeonpea germplasm from
Caribbean and Central American at the ICRISAT genebank. Plant Genetic
Resources Characterization and Utilization DOI:
http://dx.doi.org/10.1017/s1479262114000987
52. Upadhyaya, H.D., K.N. Reddy, M.I. Ahmed, C.L.L. Gowda, and M.T. Reddy, S.
Ramachandran. 2015. Identification of gaps in pigeonpea germplasm from East and
Southern Africa conserved at the ICRISAT genebank. Indian Journal of Plant
Genetic Resources. 28:180188
53. Upadhyaya, H.D., K.N. Reddy, S. Sharma, S.L. Dwivedi, and S. Ramachandran.
2015. Enhancing the value of genetic resources for use in pigeonpea improvement.
Legumes Perspectives Special issue 11:13-16. ISSN 2340-1559.
54. Lasky, J.R., H.D. Upadhyaya, P. Ramu, S. Deshpande, C.T. Hash, J. Bonnette,
T.E. Juenger, K. Hyma, C. Acharya, S.E. Mitchell, E.S. Buckler, Z. Brenton, S.
Kresovich, and G.P. Morris. 2015. Genome-environment associations in sorghum
landraces predict adaptive traits. Science Advances 1:e1400218; doi:
10.1126/sciadv.1400218
55. Sharma, S., and H.D. Upadhyaya. 2015. Pre-breeding to expand primary genepool
through introgression of genes from wild Cajanus species for pigeonpea
improvement. Legume Perspectives Special Issue 11: 1922
56. Divakara, B.N., H.D. Upadhyaya, A. Laxmi, and R. Das. 2015. Identification of
diverse genotypes with high oil content in Madhuca latifolia for further use in tree
improvement. Journal of Forestry Research. 26:369379.
57. Roorkiwal, M., M. Thudi, P.M. Gaur, H.D. Upadhyaya, N.P. Singh, and R.K.
Varshney. 2015. Chickpea translational genomics in the whole genome era.
Legumes Perspectives (Special issue) 7:79. ISSN 23401559
58. Sood, S., R.K. Khulbe, R. Arun Kumar, P.K. Agrawal, and H.D. Upadhyaya. 2015.
Barnyard millet global core collection evaluation in the submontane Himalayan
region of India using multivariate analysis. The Crop Journal 3: 517-525.
doi.10.1016/j.cj.2015.07.005
2014
59. Westengen OT, Westengen, O.T., M.A. Okongo, L. Onek , T. Berg, H.D.
Upadhyaya, S. Birkeland, S.D.K. Khalsa, H. Kristoffer, K.H. Ring, N.C. Stenseth,
and A.K. Brysting. 2014. Ethnolinguistic structuring of sorghum genetic diversity in
Africa and the role of local seedsystems.Proc.Natl.Acad.Sci.(USA)14100-
14105;www.pnas.org/cgi/doi/10.1073/pnas.1 401646111
60. Roorkiwal, M., S.N. Nayak, M. Thudi, H.D. Upadhyaya, D. Brunel, P. Mournet, D.
This, P.C. Sharma, and R.K. Varshney. 2014. Allele diversity for abiotic stress
responsive candidate genes in chickpea reference set using gene based SNP
markers. Frontiers in Plant Science.5:248.doi: 10.3389/fpls.2014.00248.
61. Roorkiwal, M., E. von Wettberg, H.D. Upadhyaya, E. Warshefsky, A. Rathore, and
R.K.Varshney. 2014. Exploring germplasm diversity to understand the
domestication process in Cicerspp. using SNP and DArT markers. PLoS ONE
9:e102016. doi:10.1371/journal.pone.0102016
62. Pandey, M.K., H.D. Upadhyaya, A. Rathore, V. Vadez, M.S. Sheshshayee,
M.Sriswathi, M. Govil, A. Kumar, M.V.C. Gowda, S. Sharma, F. Hamidou, V. Anil
Kumar, P. Khera, R.S. Bhat, Aa.W. Khan, Sube Singh, H. Li, E. Monyo, H.L. Nadaf,
G. Mukri, S. A. Jackson, B. Guo, X. Liang and R.K. Varshney. 2014. Genomewide
association studies for 50 agronomic traits in peanut using the reference set
comprising 300 genotypes from 48 countries of the semi-arid tropics of the world.
PLoS ONE 9(8): e105228. doi:10.1371/journal.pone.0105228.
63. Mahendar Thudi, M., H.D. Upadhyaya, A. Rathore, P.M. Gaur, L. Krishnamurthy,
M. Roorkiwal, S.N. Nayak, S.K. Chaturvedi, P.S. Basu, N.V.P.R. Gangarao, A. Fikre,
Paul imurto,, P.C. Sharma, M.S. Sheshashayee, S. Tobita, J. Kashiwagi, O. Ito, A.
Killian, R.K. Varshney. 2014. Genetic Dissection of Drought and Heat Tolerance in
Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping
Approaches. PLOS ONE 9 (5) p 1-12: e96758. doi:10.1371/journal.pone.0096758.
64. Saxena, R.K., Eric von Wettberg, H.D. Upadhyaya, V. Sanchez, S. Songok, P.
Kimurto, R.K. Varshney. 2014. Genetic diversity and demographic history of
Cajanus spp. illustrated from genome-wide SNPs. PLOS ONE.
doi:10.1371/journal.pone.0088568.
65. Purushothaman, R., H.D. Upadhyaya, P.M. Gaur, C.L.L. Gowda and L.
Krishnamurthy. 2014. Kabuli and desi chickpeas differ in their requirement for
reproductive duration. Field Crops Research 163:24-31.
66. Krishnamurthy, L., H.D. Upadhyaya, R. Purushothaman, C.L.L. Gowda, J.
Kashiwagi, S.L. Dwivedi, Sube Singh, V. Vadez. 2014. The extent of variation in
salinity tolerance of the minicore collection of finger millet (Eleusine coracana L.
Gaertn.) germplasm. Plant Science 227:51-59.
67. Sharma, R., A.G. Girish, H.D. Upadhyaya, P. Humayun, T.K. Babu, V.P. Rao, and
R.P. Thakur. 2014. Identification of blast resistance in a core collection of foxtail
millet germplasm. Plant Disease 98:519-524.
68. Yol, E., H.D. Upadhyaya and Bulent Uzun. 2014. Molecular marker assisted
selection for resistance to sclerotinia blight in groundnut (Arachis hypogaea L.)
Journal of Biotechnology 185S (2014) S18S36.
http://dx.doi.org/10.1016/j.jbiotec.2014.07.102
69. Kujur, A., D. Bajaj; M.S. Saxena, S. Tripathi, H.D. Upadhyaya, CL.L. Gowda, S.
Singh, A. Tyagi, M. Jain; S.K. Parida. 2014. An efficient and cost-effective approach
for genic microsatellite marker-based large-scale trait association mapping:
identification of candidate genes for seed weight in chickpea. Molecular Breeding
34: 241-265.
70. Upadhyaya, H.D., S.L. Dwivedi, P. Ramu, S.K. Singh, and S. Singh. 2014. Genetic
variability and effect of post-flowering drought on stalk sugar content in sorghum
mini core collection. Crop Science. 54:21202130.
71. Upadhyaya, H.D., S.L. Dwivedi, S.K. Singh, S. Singh, M. Vetriventhan and S.
Sharma. 2014. Forming Core Collections in Barnyard, Kodo, and Little Millets
using Morphoagronomic Descriptors. Crop Science. 54:2673-2682.
72. Upadhyaya, H.D., K.N. Reddy, S. Singh, C.L.L. Gowda, M.I. Ahmed, and V. Kumar.
2014. Diversity and gaps in Pennisetum glaucum subsp. monodii (Maire) Br.
germplasm conserved at the ICRISAT genebank. Plant Genetic Resources
Characterization and Utilizations 12:226235.
73. Upadhyaya, H.D., K.N. Reddy, S. Singh, M.I. Ahmed, V. Kumar, and S.
Ramachandran. 2014. Geographical gaps and diversity in Deenanath grass
(Pennisetum pedicellatumTrin.) germplasm conserved at the ICRISAT genebank.
Indian Journal of Plant Genetic Resources. 27:93101
74. Mukri, G., H.L. Nadaf, M.V.C. Gowda, R.S. Bhat, and H.D. Upadhyaya. 2014.
Genetic analysis for yield, nutritional and oil quality traits in RIL population of
groundnut (Arachis hypogaea L.). Indian Journal of Genetics and Plant Breeding, 74
(4). pp. 450-455.
75. Varshney, R.K., M.Thudi, H.D. Upadhyaya, S.L. Dwivedi, S. Udupa, B. Furman, M.
Baum and D.Hoisington. 2014. SSR kit to study genetic diversity in chickpea (Cicer
arietinum L.). Plant Genetic Resources. Characterization and Utilization. 12(S1);
S118S120; doi:10.1017/S1479262114000392
76. Kumari, V., M.V.C. Gowda, V. Tasiwal, M.K. Pandey, R. S. Bhat, N. Mallikarjuna,
H.D. Upadhyaya, R. K. Varshney. 2014 Diversification of primary gene pool through
introgression of resistance to foliar diseases from synthetic amphidiploids to
cultivated groundnut (Arachishypogaea L.) The Crop Journal (2014):110-119.
http://dx.doi.org/10.1016/j.cj.2014.03.002.
77. Rai, K.N., G. Velu, M. Govindaraj, H.D. Upadhyaya, A.S. Rao, H. Shivade and K.N.
Reddy. 2015. Iniadi pearl millet germplasm as a valuable genetic resource for high
grain iron and zinc densities. Plant Genetic Resources. 13:7582.
doi:10.1017/s1479262114000665.
78. Kim, D.H., M. Kashyap, A. Rathore, R.R. Das, S. Parupalli, H.D. Upadhyaya, S.
Gopalakrishnan, P.M. Gaur, Sarvjeet Singh, J. Kaur, M. Yasin and R.K. Varshney.
2014. Phylogenetic diversity of Mesorhizobium in chickpea. Journal of
Biosciences 39(3):1-5.
79. Krishnamurthy, L., H.D. Upadhyaya, C.L.L. Gowda, J. Kashiwagi, R.
Purushothaman, S. Singh, and V. Vadez. 2014. Large variation for salinity tolerance
in the core collection of foxtail millet (Setaria italica (L.) P.Beauv.) germplasm. Crop
Pasture Science. 65:353361.
80. Nirgude, M., B.B. Kalyana, Y. Shambhavi, U.M. Singh, H.D. Upadhyaya, and A.
Kumar. 2014. Development and molecular characterization of genic molecular
markers for grain protein and calcium content in finger millet (Eleusine coracana (L.)
Gaertn.) Mol. Biol. Rep. 41:11891200.
81. Upadhyaya, H.D., S.L. Dwivedi, Shivali Sharma, N. Lalitha, Sube Singh, R.K.
Varshney, and C.L.L. Gowda. 2014. Enhancement of the use and impact of
germplasm in crop improvement. Plant Genet Resources. 12 (S1):S155S159;
doi:10.1017/S1479262114000458
82. Upadhyaya, H.D., K.N. Reddy, S. Singh, C.L.L. Gowda, M. I. Ahmed and R. Senthil
Ramachandran. 2014. Latitudinal patterns of diversity in the world collection of pearl
millet landraces at the ICRISAT genebank. Plant Genetic Resources 12:91-102.
83. Upadhyaya, H.D., S.L. Dwivedi, V. Vadez, F. Hamidou, S. Singh, R.K. Varshney,
and B. Liao. 2014. Multiple Resistant and Nutritionally Dense Germplasm Identified
from Mini Core Collection in Peanut. Crop Science. 54:689-693.
2013
84. Varshney, R.K., Chi Song, R.K. Saxena, S. Azam, Sheng Yu, A. G Sharpe, S.
Cannon, J. Baek, B.D. Rosen, B. Taran, T. Millan, X. Zhang, L.D Ramsay, A. Iwata,
Y.Wang, W. Nelson, A.D. Farmer, P.M. Gaur, C. Soderlund, R.V. Penmetsa, C. Xu,
A.K. Bharti, W. He, P.Winter, S. Zhao, J.K. Hane, N. Carrasquilla-Garcia, J.A.
Condie, H.D. Upadhyaya, Ming-Cheng Luo, M. Thudi, C.L.L. Gowda, N.P Singh, J.
Lichtenzveig, K.K. Gali, J. Rubio, N. Nadarajan, Jaroslav Dolezel, K.C. Bansal, X.
Xu, D. Edwards, G. Zhang, G. Kahl, J. Gil, K.B. Singh, S.K. Datta, S.A. Jackson, J.
Wang and D.R. Cook. 2013. Draft genome sequence of chickpea (Cicer arietinum)
provides a resource for trait improvement. Nature Biotechnology 31:240-248;
doi:10.1038/nbt.2491
85. Morris, G.P., P. Ramu, S.P. Deshpande, C.T. Hash, T. Shah, H.D. Upadhyaya, O.
Riera-Lizarazu, P.J. Brown, C.B. Acharya, S.E. Mitchell, J. Harriman, J.C. Glaubitz,
E.S. Buckler, and S. Kresovich. 2013. Population genomic and genome-wide
association studies of agroclimatic traits in sorghum. Proc. Natl. Acad. Sci. (USA)
110:453458.
86. Kujur A., D. Bajaj, M.S. Saxena, S. Tripathi, H. D. Upadhyaya, C.L.L. Gowda, S.
Singh, M. Jain, A.K. Tyagi, and S.K. Parida. 2013. Functionally Relevant
Microsatellite Markers from Chickpea Transcription Factor Genes for Efficient
Genotyping Applications and Trait Association Mapping. DNA Research 20:355-
373.
87. Billot, C., P. Ramu, S. Bouchet, J. Chantereau, M. Deu, L. Gardes, J-L Noyer, J.-F.
Rami, R. Rivallan, Y. Li, P. Lu, T. Wang, R.T. Folkertsma, E. Arnaud, H.D.
Upadhyaya, J.-C. Glaszmann, and C.T. Hash. 2013. Massive sorghum collection
genotyped with SSR markers to enhance use of global genetic resources. PLoS
ONE 8: e59714.
88. Upadhyaya, H.D., Yi-Hong Wang, C.L.L. Gowda and S. Sharma. 2013.
Association mapping of maturity and plant height using SNP markers with the
sorghum mini core collection. Theoretical and Applied Genetics 126:2003-2015;
doi: 10.1007/s00122-013-2113-x.
89. Ramu, P., C. Billot, R. Jean-francois, S. Senthilvel, H.D. Upadhyaya, L. Reddy, and
C.T. Hash. 2013. Assessment of genetic diversity in the sorghum reference set using
EST-SSR markers. Theoretical and Applied Genetics. 126(8): 2051-2064.
doi:10.1007/s00122-013-2117-6
90. Gowda, C.L.L., H.D. Upadhyaya, S. Sharma, R.K. Varshney and S. L. Dwivedi.
2013. Exploiting genomic resources for efficient conservation and utilization of
chickpea, groundnut, and pigeonpea collections for crop improvement. The Plant
Genome: doi: 10.3835/plantgenome2013.05.0016.
91. Khera, P., H.D. Upadhyaya, M.K. Pandey, M. Roorkiwal, M. Sriswathi, P. Janila, Y.
Guo, M.R. McKain, E.D. Nagy, S.J. Knapp, J. Leebens-Mack, J.A. Conner, P.
Ozias-Akins, and R.K. Varshney. 2013. Single nucleotide polymorphismbased
genetic diversity in the reference set of peanut (Arachis spp.) by developing
and applying cost-effective kompetitive allele specific polymerase chain reaction
genotyping assays. The Plant Genome 6. doi:10.3835/plantgenome2013.06.0019
92. Roorkiwal, M., S.L. Sawargaonkar, A. Chitikineni, M. Thudi, R.K. Saxena, H.D.
Upadhyaya, M.I. Vales, O. Riera-Lizarazu, and R.K. Varshney. 2013. Single
nucleotide polymorphism genotyping for breeding and genetics applications
in chickpea and pigeonpea using the BeadXpress platform. The plant genome 6.
doi: 10.3835/plantgenome2013.05.0017.
93. Krishnamurthy, L., J. Kashiwagi, H.D. Upadhyaya, C.L.L. Gowda, P.M. Gaur, Sube
Singh, R. Purushothaman and R.K. Varshney. 2013. Partitioning coefficient- a trait
that contributes to drought tolerance in chickpea. Field Crops Research 149:354-
365.
94. Kashiwagi, J., L. Krishnamurthy, P.M. Gaur, H.D. Upadhyaya, R.K. Varshney, S.
Tobita. 2013. Traits of relevance to improve yield under terminal drought stress in
chickpea (C. arietinum L.). Field Crops Research 145: 8895.
95. Krishnamurthy, L., J. Kashiwagi, S. Tobita, O. Ito, H.D. Upadhyaya, C.L.L. Gowda,
P.M. Gaur, M.S. Sheshshayee, S. Singh, V. Vadez, and R.K. Varshney. 2013.
Variation in carbon isotope discrimination and its relationship with harvest index in
the reference collection of chickpea germplasm. Functional Plant Biology. 40:1350
1361.
96. Upadhyaya, H.D., Yi-Hong Wang, Rajan Sharma, Shivali Sharma. 2013.
Identification of genetic markers linked to anthracnose resistance in sorghum using
association analysis. Theoretical and Applied Genetics. 126:1649-1657. doi:
10.1007/s00122-013-2081-1.
97. Sharma, R., H.D. Upadhyaya, S.V. Manjunatha, K.N. Rai, S.K. Gupta, and R.P.
Thakur. 2013. Pathogenic Variation in the Pearl Millet Blast Pathogen Magnaporthe
grisea and Identification of Resistance to Diverse Pathotypes. Plant Disease 97:
189-195.
98. Vetriventhan, M., Vetriventhan, M., H.D. Upadhyaya, C.R. Anandakumar, S.
Senthilvel, R.K. Varshney, and H.K. Parizies. 2013. Population structure and linkage
disequilibrium of ICRISAT foxtail millet (Setaria italica (L.) P. Beauv.) core
collection. Euphytica 196:423435.
99. Yi-Hong Wang, H.D. Upadhyaya, A. Millie Burrell, Sayed Mohammad Ebrahim
Sahraeian, Robert R. Klein, and Patricia E. Klein.2013 Genetic Structure and
Linkage Disequilibrium in a Diverse, Representative Collection of the C4 Model
Plant, Sorghum bicolor. G3: Genes, Genomes, Genetics. Vol 3: 783-793.
doi: 10.1534/g3.112.004861
100. Upadhyaya, H.D., Yi-Hong, R. Sharma and S. Sharma. 2013. SNP markers linked
to leaf rust and grain mold in sorghum. Molecular Breeding. 32: 451-462; doi:
10.1007/s11032-013-9883-3.
101. Upadhyaya, H.D., N. Dronavalli, S.L. Dwivedi, J. Kashiwagi, L. Krishnamurthy, S.
Pande, H.C. Sharma, V. Vadez, Sube Singh, R.K. Varshney and C.L.L. Gowda.
2013. Mini Core Collection as a Resource for Identifying New Sources of Variation.
Crop Science 53:25062517.
102. Kiran Babu T., R. P. Thakur, H.D. Upadhyaya, P.N. Reddy, R. Sharma, A.G. Girish,
N.D.R.K. Sarma. 2013. Resistance to blast (Magnaporthe grisea) in a mini-core
collection of finger millet germplasm. European Journal of Plant Pathology.
135:299311
103. Upadhyaya, H.D., K.N. Reddy, Sube Singh and C.L.L. Gowda. 2013. Phenotypic
diversity in Cajanus species and identification of promising sources for agronomic
traits and seed protein content. Genetic Resource and Crop Evolution. 60:639659.
104. Kiran Babu, T., R. Sharma, H.D. Upadhyaya, P.N. Reddy, S. Deshpande, S.
Senthilvel, N.D.R.K. Sarma and R.P. Thakur. 2013. Evaluation of genetic diversity
in Magnaporthe grisea populations adapted to finger millet using Simple Sequence
Repeats (SSRs) markers.Physiological and Molecular Plant Pathology 84 :10-18.
105. Upadhyaya, H.D., K.N. Reddy, D.V.S.S.R. Sastry and C.L.L. Gowda. 2013. The
wild genepool of pigeonpea at ICRISAT genebank Status and distribution. Indian
Journal of Plant Genetic Resources 26:193-201.
106. Singh, R., N. Kumari, H.D. Upadhyaya, R. Yadav, Vaishali, I. Choi and R. Kumar.
2013. Molecular analysis for genetic structure of biotic and abiotic stress resistant
genotypes in chickpea (Cicer arietinum L.). Indian Journal of Biotechnology.
12:537-540.
107. Sharma, S., H.D. Upadhyaya, C.L.L. Gowda, Shiv Kumar and Sube Singh. 2013.
Genetic analysis for seed size in three crosses of chickpea (Cicer arietinum L.).
Canadian J. of Plant Sci. 93: 387-395.
2012
108. Varshney, R.K., W. Chen, Y. Li, A.K. Bharti, R.K. Saxena, J.A. Schlueter, M.T. A.
Donoghue, S. Azam, G. Fan, A. M. Whaley, A D Farmer, J. Sheridan, A. Iwata, R.
Tuteja, R.V. Penmetsa, W. Wu, H. D. Upadhyaya, Shiaw-Pyng Yang,T. Shah, K.
B. Saxena, T. Michael, W.R. McCombie, B. Yang, G. Zhang, H. Yang et. al. 2012.
Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of
resource-poor farmers. Nature Biotechnology 30:83-89; doi:10.1038/nbt.2022.
109. Hiremath, P.J., Hiremath, P.J., A. Kumar, R.V. Penmetsa, A. Farmer, J.A. Schlueter,
S.K. Chamarthi, A.M. Whaley, N. Carrasquilla-Garcia, P.M. Gaur, H.D.
Upadhyaya, P.B.K. Kishor, T.M. Shah, D.R. Cook, and R.K. Varshney. 2012. Large-
scale development of cost-effective SNP marker assays for diversity assessment
and genetic mapping in chickpea and comparative mapping in legumes. Plant
Biotechnol. J. 10:716-732.
doi:10.1111/j.1467-7652.2012.00710.x.
110. Upadhyaya, H.D., J. Kashiwagi, R.K. Varshney, P.M. Gaur, K.B. Saxen, L.
Krishnamurthy, C.L.L. Gowda, R.P.S. Pundir, S.K. Chaturvedi, P.S. Basu and I.P.
Singh. 2012. Phenotyping chickpeas and pigeonpeas for adaption to drought.
Frontiers in Plant Physiology 3:179. doi:10.3389/fphys.2012.00179.
111. Saxena, R.K., R.V. Penmetsa, H.D. Upadhyaya, A. Kumar, N. Carrasquilla-Garcia,
J.A. Schlueter, A. Farmer, A.M. Whaley, B.K. Sarma, G.D. May, D.R. Cook, and
R.K. Varshney. 2012. Large-scale development of cost-effective single-nucleotide
polymorphism marker assays for genetic mapping in pigeonpea and comparative
mapping in legumes. DNA Research. 19:449-461.doi:10.1093/dnares/dss025
112. Huang, L., H. Jiang, X. Ren, Y. Chen, Y. Xiao Y, Xi. Zhao, M. Tang, J. Huang, H.D.
Upadhyaya, L. Boshou. 2012. Abundant microsatellite diversity and oil content in
wild Arachis Species. PLoS ONE 7(11): e50002. doi:10.1371/journal.pone.0050002.
113. Mulualem T Kassa, R.V. Penmetsa, N. Carrasquilla-Garcia, B.K. Sarma, S. Datta,
H.D. Upadhyaya, R.K. Varshney, Eric JB con Wettberg, D. Cook,. 2012. Genetic
patterns of domestication in pigeonpea (Cajanus cajan (L.) Millsp.) and wild Cajanus
relatives. PLoS ONE 7(6): e39563. doi:10.1371/journal.pone.0039563.
114. Hamidou, F., P. Ratnakumar, O. Halilou, O. Mponda, T. Kapewa, E. Monyo, I. Faye,

B.R. Ntare, S.N. Nigam, H.D. Upadhyaya, and V. Vadez. 2012. Selection of
intermittent drought tolerant lines across years and locations in the reference
collection of groundnut (Arachis hypogaea L.). Field Crops Research. 126:189199.
115. Yi-Hong Wang, Paul Bible, Rasiah Loganantharaj and H. D. Upadhyaya. 2012.
Identification of SSR markers associated with height using pool-based genome-wide
association mapping in sorghum. Mol Breeding 30:281-292; doi: 10.1007/s11032-
011-9617-3.
116. Upadhyaya, H.D., Yi-Hong Wang, S. Sharma, S. Singh, K.H. Hasenstein. 2012.
SSR markers linked to kernel weight and tiller number in sorghum identified by
association mapping. Euphytica 187: 401-410; doi: 10.1007/s10681-012-0726-9.
117. Upadhyaya, H.D., D. Naresh, Sube Singh, and S.L. Dwivedi. 2012. Variability and
stability for kernel iron and zinc contents in ICRISAT mini core collection of peanut.
118. Upadhyaya, H.D., G. Mukri, H.L. Nadaf and Sube Singh. 2012. Variability and
Stability Analysis for Nutritional Traits in the Mini Core Collection of Peanut. Crop
Science 52:168-178.
119. Mir, R.R., R.K. Saxena, K.B. Saxena, H.D. Upadhyaya, A. Kilian, D.R Cook, and
R.K. Varshney. 2013. Whole- genome scanning for mapping determinacy in
pigeonpea (Cajanus spp.). Plant Breed. 132:472478. doi:10.1111/j.1439-
0523.2012.02009.x.
120. Mallikarjuna, N., S. Srikanth, R.K. Vellanki, D.R. Jadhav, K. Das, and H.D.
Upadhyaya. 2012. Meiotic analysis of the hybrids between cultivated and synthetic
tetraploid groundnuts. Plant Breeding 131:135-138.
121. Mukri, G., H.L. Nadaf, R.S. Bhat, M.C.V. Gowda, H.D. Upadhyaya and V. Sujay.
2012. Phenotypic and molecular dissection of ICRISAT mini core collection of
peanut (Arachis hypogaea L.) for high oleic acid. Plant Breeding 131:418-422;
doi:10.1111/j.1439-0523.2012.01970.x.
122. Gopalakrishnan, S., H.D. Upadhyaya, S. Vadlamudi, P. Humayun, M.S. Vidya, G.
Alekhya, A. Singh, R. Vijayabharathi, R.K. Bhimineni, M. Seema, A. Rathore and
O.P. Rupela. 2012. Plant growth-promoting traits of biocontrol potential bacteria
isolated from rice rhizosphere. SpringerPlus 1:7.
http://www.springerplus.com/content/1/1/71
123. Upadhyaya, H.D., Yi-Hong Wang, S. Sharma and S. Singh. 2012. Association
mapping of height and maturity across five environments using the sorghum mini
core collection. Genome. 55(6): 471-479.
124. Varshney, R.K., K. Himabindu, M. Roorkiwal, M. Thudi, M.K. Pandey, R.K. Saxena,
S.K. Chamarthi, S.M. Mohan, N. Mallikarjuna, H.D. Upadhyaya, P.M. Gaur, L.
Krishnamurthy, K.B. Saxena, S.N. Nigam and S. Pande. 2012. Advances in genetics
and molecular breeding of three legume crops of semi-arid tropics using next-
generation sequencing and high-throughput genotyping technologies. J. Biosci.
37:811820.
125. Parameshwarappa, S.G., P.M. Salimath, H.D. Upadhyaya, S.T. Kajjidoni and S.S.
Patil. 2012. Heterosis in relation to genetic divergence in minicore collections of
Chickpea (Cicer arietinum L.). Indian Journal Genetics 72(3): 303-308.
126. Divakara, B.N., H.D. Upadhyaya and B. Fandohan. 2012. Identification and
divergence studies of genotypes of Tamarindus indica (Fabaceae) with superior pod
traits. International Journal Biological Chemical Sciences 5(6): 509-514.
127. Vetriventhan, M., H.D. Upadhyaya, C.R. Anandakumar, S. Senthilvel, H.K. Parzies,
A. Bharathi, R.K. Varshney and C.L.L. Gowda. 2012. Assessing genetic diversity,
allelic richness and genetic relationship among races in ICRISAT foxtail millet core
collection. Plant Genetic Resources 10:214-223.
128. Upadhyaya, H.D., K.N. Reddy, M. I. Ahamed and C.L. L. Gowda. 2012.
Identification of gaps in pearl millet germplasm from East and Southern Africa
conserved at the ICRISAT genebank. Plant Genetic Resources Characterization
and utilization10(3); 202213.
129. Upadhyaya, H.D., N. Dronavalli, C.L. L. Gowda and S. Singh. 2012. Mini core
collections for enhanced utilization of genetic resources in crop improvement. Indian
Journal Plant Genetic Resources. 25(1): 111124.
130. Upadhyaya, H. D., K. N. Reddy, M. Irshad Ahmed, N. Dronavalli and C. L. L. Gowda.
2012. Latitudinal variation and distribution of photoperiod and temperature sensitivity
for flowering in the world collection of pearl millet germplasm at ICRISAT genebank.
Plant Genetic Resources: Characterization and Utilization 10: 5969.
131. Sharma, M., A. Rathore, U. N. Mangala, R. Ghosh, S. Sharma, H.D. Upadhyaya
and S. Pande. 2012. New sources of resistance to Fusarium wilt and sterility mosaic
disease in a mini-core collection of pigeonpea germplasm. European Journal of
Plant Pathology 133:707-714.
132. Sharma, R., H.D. Upadhyaya, S.V. Manjunatha, V.P. Rao and R.P. Thakur. 2012.
Resistance to foliar diseases in a Mini-core Collection of Sorghum Germplasm. Plant
Dis. 96:1629-1633.
133. Pandey, M.K., Pandey, M.K., B. Gautami, T. Jayakumar, M. Sriswathi, H.D.
Uapdhyaya, M.V.C. Gowda, T. Radhakrishnan, D.J. Bertioli, S.J. Knapp, D.R. Cook,
and R.K. Varshney. 2012. Highly informative genic and genomic SSR markers to
facilitate molecular breeding in cultivated groundnut (Arachis hypogaea). Plant
Breed.131:139147. doi: 10.1111/j.1439-0523.2011.01911.x.
134. Parameshwarappa, S.G., P.M. Salimath, H.D. Upadhyaya, S.S. Patil and S.T.
Kajjidoni. 2012. Genetic variability studies in minicore collection of chickpea (Cicer
arietinum L.) under different environments. Karnataka Journal Agricultural Science
25 (3): 305-308.
135. Kiran Babu, T., R.P. Thakur, P.N. Reddy, H.D. Upadhyaya, A.G. Girish and
N.D.R.K. Sarma. 2012. Development of a field screening technique and
identification of blast resistance in finger millet core collection. Indian Journal of Plant
Protection 40:45-51.
2011
136. Bohra, A, A. Dubey, R. Saxena, P.R. Varma; K.N. Poornima, N. Kumar, A. Farmer,
G. Srivani, H.D. Upadhyaya, R. Gothalwal, R. Ramareddy, D. Singh, K.B. Saxena,
P.B. Kavikishor, N. Singh, C. Town, G. May, D. Cook and R.K. Varshney. 2011
Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for
genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.) BMC
Plant Biology 11:56. http://www.biomedcentral.com/1471-2229/11/56
137. Thudi, M., Thudi, M., A. Bohra, S.N. Nayak, N. Varghese, T.M. Shah, R.V.
Penmetsa, T. Nepolean, S. Gudipati, P.M. Gaur, P.L. Kulwal, H.D.
Upadhyaya, P.B. KaviKishor, P. Winter, G. Kahl, C.D. Town, A. Kilian, D.R. Cook,
and R.K. Varshney. 2011. Novel SSR markers from BAC-end sequences, DArT
arrays and a comprehensive genetic map with 1,291 marker loci for chickpea (Cicer
arietinum L.). PLoS ONE 6:e27275.
138. Upadhyaya, H.D., C.R. Ravishankar, Y. Narasimhudu, N.D.R.K. Sarma, S.K. Singh,
S.K. Varshney, V. G. Reddy, S. Singh, H.K. Parzies, S.L. Dwivedi, H.L. Nadaf, K.L.
Sahrawat and C.L.L. Gowda. 2011. Identification of trait-specific germplasm and
developing a mini core collection for efficient use of foxtail millet genetic resources
in crop improvement. Field Crops Research 124:459-467.
139. Upadhyaya, H.D., S. Ramesh, S. Sharma, S.K. Singh, S.K. Varshney, N.D.R.K.
Sharma, C.R. Ravishanker, Y. Narasimhudu, V.G. Reddy, K.L. Sahrawat, T.N.
Dhanalakshmi, M.A. Mgonja, H.K. Parzies, C.L.L. Gowda and S. Singh. 2011.
Genetic diversity for grain nutrients contents in a core collection of finger millet
[Eleusine coracana (L.) Gaertn.] germplasm. Field Crops Research 121:42-52.
140. Gujaria, N., Ashish Kumar, Preeti Dauthal, Anuja Dubey, H. Pavana, A. Bhanu
Prakash, F. Andrew, B. Mangla; Trushar Shah, P. Gaur, H.D. Upadhyaya, S.
Bhatia, D. Cook, G. May and R.K. Varshney. 2011. Development and use of genic
molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer
arietinum L.). Theor. Appl. Genet. 122:15771589.
141. Krishnamurthy, L., N.C. Turner, P. M. Gaur, H.D. Upadhyaya, K.H.M. Siddique, R.K.
Varshney and V.Vadez 2011a. Consistent variation across soil types in salinity
resistance of a diverse range of chickpea (Cicer arietinum L.) genotypes. J. Agron.
142. Upadhyaya, H.D., Upadhyaya, H.D., S.L. Dwivedi, H.L. Nadaf, and S. Singh. 2011k.
Phenotypic diversity and identification of wild Arachis accessions with useful
agronomic and nutritional traits. Euphytica 182:103115.
143. Upadhyaya, H.D., S.L. Dwivedi, M. Ambrose, N. Ellis, J. Berger, P. Smkal, D.
Debouck, G. Duc, D. Dumet, A. Flavell, S.K. Sharma, N. Mallikarjuna and C.L.L.
Gowda. 2011. Legume genetic resources: management, diversity assessment, and
utilization in crop improvement. Euphytica 180:27-47.
144. Upadhyaya, H.D., S. Sharma, S. Singh and M. Singh. 2011. Inheritance of drought
resistance related traits in two crosses of groundnut (Arachis hypogaea L.).
Euphytica 177: 55-66.
145. Upadhyaya, H.D., N. Dronavalli, C.L.L. Gowda and Sube Singh. 2011. Identification
and evaluation of chickpea germplasm for tolerance to heat stress. Crop Science.
51: 2079-2094.
146. Kottapalli, P., H.D. Upadhyaya, K.R. Kottapalli, P. Payton, S.L. Dwivedi, M. Burow,
K. O. David, S.Sanogo, and N. Puppala. 2011. Population structure and diversity in
Valencia peanut germplasm collection. Crop Science 51: 1089-1100.
147. Kumar, S., J. Malik, P.Thakur, S. Kaistha, K. D. Sharma, H.D. Upadhyaya, J.D.
Berger and H. Nayyar. 2011. Growth and metabolic responses of contrasting
chickpea (Cicer arietinum L.) genotypes to chilling stress at reproductive phase. Acta
Physiol Plant. 33: 779-787, doi: 10.1007/s11738-010-0602-y.
148. Vadez, V., L. Krishnamurthy, C. T. Hash, H. D. Upadhyaya and A. K. Borrell. 2011.
Yield, transpiration efficiency, and water-use variations and their interrelationships
in the sorghum reference collection. Crop & Pasture Science 62:645655.
149. Upadhyaya, H.D., S. Sharma, C.L.L. Gowda, V. Gopal Reddy and S. Singh. 2011.
Developing proso millet (Panicum miliaceum L.) core collection using geographic
and morpho-agronomic data. Crops and Pasture Science 62(5): 383-389.
150. Shi Ying Yang, R.K. Saxena, P.L. Kulwal, G.J. Ash, A. Dubey, J.D.I. Harper, H.D.
Upadhyaya, R. Gothalwal, A. Kilian, and R.K. Varshney. 2011. The first genetic
map of pigeonpea based on Diversity Arrays Technology (DArT) markers. J of
Genetics 90:103-109.
151. Upadhyaya H.D., S. Sharma and Gowda CLL. 2011. Major genes with additive
effects for seed size in kabuli chickpea (Cicer arietinum L.). Journal of Genetics 90:
479-482.
152. Krishnamurthy, L., H.D. Upadhyaya, K.B. Saxena and Vincent Vadez. 2011.
Variation for temporary waterlogging response within the mini core pigeonpea
germplasm. Journal of Agricultural Science 150, 357364.
153. H.D. Upadhyaya, K.N. Reddy, RPS Pundir, Sube Singh, C.L.L. Gowda and M.I.
Ahmed. 2011. Diversity and geographical gaps in Cajanus scarabaeoides (L.) Thou
germplasm conserved at ICRISAT genebank. Plant Genetic Resources:
Characterization and Utilization 11(1):3-14. doi:10.1017/s1479262111000736.
154. Upadhyaya, H.D., K.N. Reddy, S. Shivali, R.K. Varshney, R. Bhattacharjee, S.
Singh and C.L.L. Gowda. 2011. Pigeonpea composite collection and identification
of germplasm in crop improvement programmes. Plant Genetic Resources:
Characterization and Utilization 9(1):97108.
155. Upadhyaya, H.D., M. Thudi, N. Dronavalli, N. Gujaria, S. Singh, S. Sharma and R.K.
Varshney. 2011. Genomic tools and germplasm diversity for chickpea improvement.
Plant Genetic Resources: Characterization and Utilization 9(1): 45-58.
Kajjidoni. 2011. Genetic variability studies in minicore collections of chickpea (Cicer
arietinum L.) under different environments. Indian J. Genet. Resour. 24(1):43-48.
Kajjidoni. 2011. Genetic divergence under three environments in a minicore
collection of chickpea (Cicer arietinum L.). Indian J. Plant Genet. Resour. 24(2):
177185.
158. Sastry, D.V.S.S.R., H.D. Upadhyaya and C.L.L. Gowda. 2011. Rescuing and
regenerating germplasm in large collections- the case of pigeonpea accessions ICP
9820. Journal of SAT Agricultural Research 9.
159. Jorge, M.A., G. Claessens, J. Hanson, M. E. Dulloo, E. Goldberg, I. Thormann, S.
Alemayehu, E. Gacheru, A. Amri, E. Benson, D. Dumet, N. Roux, P. Rudebjer, R. S.
Hamilton, I. Sanchez, S. Sharma, S. Taba, H.D. Upadhyaya and I.V.D. Houwe.
2011. Knowledge sharing on best practices for managing crop genebanks. Agri Info
Worldwide 3: 101-106.
160. Upadhyaya, H.D., D. Yadav, K.N. Reddy, C.L.L. Gowda and S. Singh. 2011.
Development of Pearl millet minicore collection for enhanced utilization of germplasm.
Crop Science 51: 217-223.
161. Gowda C.L.L., H.D. Upadhyaya, N. Dronavalli and S. Singh. 2011. Identification of
large-seeded high-yielding stable kabuli chickpea germplasm lines for use in crop
improvement. Crop Science 51:198-209.
162. Kumar, S., H. Nayyar, R.K. Bhanwara and H.D. Upadhyaya. 2011. Chilling stress
effects on reproductive biology of chickpea (Cicer arietinum L.). An Open Access
SAT e- Journal Journal of SAT Agricultural Research 8.
163. Divakara, B.N., H.D. Upadhyaya, and R. Krishnamurthy. 2011. Identification and
evaluation of diverse genotypes in Pongamia pinnata (L.) Pierre. for genetic
improvement in seed traits. J. Biodiver. Ecol. Sci. 1:179190.
164. Sastry, D.V.S.S.R., H.D. Upadhyaya and C.L.L. Gowda. 2011. Germplasm
conservation strategies- impact of conditioning on the viability of dry pearl millet
seeds. Journal of SAT Agricultural Research 9.
2010
165. Glaszmann, J.C., B. Kilian, H.D. Upadhyaya and R.K. Varshney. 2010. Accessing
genetic diversity for crop improvement. Current Opinion in Plant Biology 13:167-173.
166. Koppolu, R., H.D. Upadhyaya, S.L. Dwivedi, D.A. Hoisington, and R.K. Varshney.
2010. Genetic relationships among seven sections of genus Arachis studied by
SSR markers. BMC Plant Biol. 10:15. Doi: 10.1186/1471-2229-10-15.
167. Krishnamurthy, L., J. Kashiwagi, P.M. Gaur, H.D. Upadhyaya, and V. Vadez. 2010.
Sources of tolerance to terminal drought in the chickpea (Cicer arietinum L.) minicore
germplasm. Field Crops Research 119:322-330.
168. Khedikar, Y., M.V. C. Gowda, C. Sarvamangala, K.V. Patgar, H.D. Upadhyaya, and
R.K. Varshney. 2010. A QTL study on late leaf spot and rust revealed one major
QTL for molecular breeding for rust resistance in groundnut (Arachis hypogaea L.)
Theor. Appl. Genet. 121:971984.
169. Sharma, R., V.P. Rao, H.D. Upadhyaya, V.G. Reddy and R.P. Thakur. 2010.
Resistance to grain mold and downy mildew in a mini core collection of sorghum
germplasm. Plant Disease 94:439-444.
170. Varshney, R.K., R.V. Penmetsa, S. Dutta, P.L. Kulwal, R.K. Saxena, S. Datta, T.R
Sharma, B. Rosen, N. Carrasquilla-Garcia, A.D. Farmer, A. Dubey, K.B. Saxena, J.
Gao, B. Fakrudin, M.N. Singh, B.P. Singh, K. B. Wanjari, M. Yuan, R.K. Srivastava,
A. Kilian, H.D. Upadhyaya, N. Mallikarjuna, C.D. Town, G.E. Bruening, G. He, G.D.
May, R. McCombie, S.A. Jackson, N.K. Singh and D. R. Cook. 2010. Pigeonpea
genomics initiative (PGI): an international effort to improve crop productivity of
pigeonpea (Cajanus cajan L.). Molecular Breeding 26: 393-408.
171. Upadhyaya, H.D., N.D.R.K Sarma, C.R. Ravishankar, T. Albrecht, Y. Narasimhudu,
S.K. Singh, S.K. Varshney, V.G. Reddy, S. Singh, S.L. Dwivedi, N. Wanyera, C.O.A.
Oduori, M.A. Mgonja, D.B. Kisandu, H.K. Parzies and C.L.L. Gowda. 2010.
Developing a mini-core collection in finger millet using multilocation data. Crop
Science 50: 1924-1931.
172. Upadhyaya, H.D., S. Sharma, B. Ramulu, R. Bhattacharjee, C.L.L. Gowda, V. G.
Reddy and S. Singh. 2010. Variation for qualitative and quantitative traits and
identification of trait-specific sources in new sorghu germplasm. Crops and Pasture
Science. 61(8): 609-618.
173. Curan A. B., E. Dulloo, P. Mathur, P. Brahmi, V. Tyagi, R.K. Tyagi and H.D.
Upadhyaya. 2010. Plant Genetic Resources and Germplasm Use in India. Asian
Biotechnology and Development Review 12(3): 17-34.
174. Upadhyaya, H.D., K.N. Reddy, M. Irshad and C.L.L. Gowda. 2010. Identification of
gaps in pearl millet germplasm from Asia conserved at the ICRISAT genebank. Plant
Genetic Resources: Characterization and Utilization 8:267-276.
175. Jiang, H. F., X.P. Ren, S.Y. Wang; X.J. Zhang, J.Q. Huang, L. BoShou; C.C.
Holbrook and H.D. Upadhyaya. 2010. Development and evaluation of peanut
germplasm with resistance to Aspergillus flavus from core collection. Acta
Agronomica Sinica 36(3):428-434.
176. Parameshwarappa, S.G., P. M. Salimath, H. D. Upadhyaya, S. S. Patil, S. T.
Kajjidoni and B. C. Patil. 2010. Characterization of drought tolerant accessions
identified from the minicore of chickpea (Cicer arietinum L.). Indian Journal of
Genetics and Plant Breeding. 70(2): 125-131.
177. Upadhyaya, H.D., K.N. Reddy, C.L.L Gowda and S. Singh. 2010. Identification and
evaluation of vegetable type pigeonpea (Cajanus cajan (L.) Millsp.) in the world
germplasm collection at ICRISAT Genebank. Plant Genetic Resources:
Characterization and Utilization 2010; 19; doi:10.1017/S1479262110000122
178. Kashiwagi, J., H. D. Upadhyaya and L. Krishnamurthy. 2010. Significance and
genetic diversity of SPAD chlorophyll meter reading in chickpea germplasm in the
semi-arid environments. Journal of Food Legumes 23:99-105.
179. Hui-Fang, J., R. Xiao-Ping, Z. Xiao-Jie, H. Jia-Quan, L. Yong, Y. Li-Ying, L. Bo-
Shou, H.D. Upadhyaya and C.C. Holbrook. 2010. Comparison of genetic diversity
between peanut mini core collections from China and ICRISAT by SSR Markers.
Acta Agronomica Sinica 2010, 36(7): 10841091.
180. Upadhyaya, H.D., D. Yadav, N. Dronavalli, C.L.L. Gowda and S. Singh. 2010. Mini
core germplasm collections for infusing genetic diversity in plant breeding programs.
e-journal of Plant Breeding, 1: 1294-1309.
https://sites.google.com/site/ispbtnau/publications
181. Meena, H.P., J. Kumar, H.D. Upadhyaya, C. Bharadwaj, S.K. Chauhan, A.K. Verma
and A.H. Rizvi. 2010. Chickpea (Cicer arietinum L.) mini core germplasm collection
as rich sources of diversity for crop improvement. Journal of SAT Agricultural
Research 8:5.
2009
182. Nayak, S.N. J. Balaji, H.D. Upadhyaya, C.T. Hash, P.B.K. Kishor, D.
Chattopadhyay, L.M. Rodriquez, M.W. Blair M. Baum, K. McNally, D. This, D.A.
Hoisington, and R.K. Varshney. 2009. Isolation and sequence analysis of DREB2A
homologues in three cereals and two legume species. Plant Sci. 177:460467.
183. Upadhyaya, H.D., L.J. Reddy, S.L. Dwivedi, C.L.L. Gowda, and S. Singh. 2009.
Phenotypic diversity in cold-tolerant peanut (Arachis hypogaea L.) germplasm.
Euphytica 165:279291.
184. Challinor, A.J., T. Wheeler, D. Hemming and H.D. Upadhyaya. 2009. Ensemble yield
simulations: crop and climate uncertainties, sensitivity to temperature and genotype
adaptation to climate change. Climate Research 38:117-127.
185. Upadhyaya, H.D., C.L.L. Gowda, K.N. Reddy and S. Singh. 2009. Augmenting the
pearl millet core collection for enhancing germplasm utilization in crop improvement.
Crop Science 49: 573-580.
186. Upadhyaya, H.D., R.P.S. Pundir, S.L. Dwivedi, C.L.L. Gowda, V. Gopal Reddy and
S. Singh. 2009. Developing a mini core collection of sorghum for diversified
utilization of germplasm. Crop Science 49: 1769-1780.
187. Upadhyaya, H.D., K.N. Reddy, M. Irshad Ahmed, C.L.L. Gowda and B.I.G.
Haussmann. 2009. Identification of geographical gaps in the pearl millet germplasm
conserved at ICRISAT Genebank from West and Central Africa. Plant Genetic
Resources: Characterization and Utilization: 8:45-51.
188. Nigam, S.N., F. Waliyar, R. Aruna, S. V. Reddy, P. Lava Kumar, P.Q. Craufurd, A.T.
Diallo, B.R. Ntare and H.D. Upadhyaya. 2009. Breeding peanut for resistance to
aflatoxin contamination at ICRISAT. Peanut Science 36: 42-49
189. Guntur, S.V., AKMZ, Hossain, K. Nakahara, T. Ishikawa, M. Yanbuaban, T.
Yoshihashi, H. Ono, M. Yoshida, C.T. Hash, H.D. Upadhyaya, P. Srinivasarao,
B.V.S. Reddy, K.L. Sahrawat and O. Ito. 2009. Biological nitrification inhibition (BNI)
potential in sorghum. UC Davis: The Proceedings of the International Plant Nutrition
Colloquium XVI. Retrieved from: http://escholarship.org/uc/item/5tp8s9pj
190. Upadhyaya, H.D., S. Sharma, C.L.L. Gowda, D.V.S.S.R Sastry, S. Singh, S.K.
Sharma, Amri Ahmed, Kenneth Street, Natalya Rukhkyan, Gabriela Antalikova,
Siyka Stoyanova, Bob Redden and Andreas Borner. 2009. Best practices for
chickpea genebank management. Available at http://cropgenebank.sgrp.cgiar.org/
191. Ashok, A., B.V.S. Reddy, B. Ramaiah, P. Sanjana Reddy, K.L. Sahrawat and H.D.
Upadhyaya. 2009. Genetic variability and plant character association of grain Fe
and Zn in selected core collection accessions of sorghum germplasm and breeding
lines. SAT e-Journal 7:1-4.
192. Reddy, V.G., H.D. Upadhyaya, C.L.L. Gowda and Sube Singh. 2009.
Characterization of eastern African finger millet germplasm for qualitative and
quantitative characters at ICRISAT. SAT e-Journal 7:1-9.
2008
193. Upadhyaya, H.D., S.L. Dwivedi, M. Baum, R.K. Varshney, S.M. Udupa, C.L.L.
Gowda, D. Hoisington and S. Singh. 2008. Genetic structure, diversity and allelic
richness in composite collection and reference set in chickpea (Cicer arietinum L.).
BMC Plant Biology 8:106. http://www.biomedcentral.com/1471-2229/8/106.
194. Kashiwagi, J., L. Krishnamurthy, P.M. Gaur, S. Chandra and H.D. Upadhyaya.
2008. Estimation of gene effects of the drought avoidance root characteristics in
chickpea (C. arietinum L.). Field Crops Research 105:64-69.
195. Kaur, G., S. Kumar, H. Nayyar and H.D. Upadhyaya. 2008. Cold stress injury during
pod-filling in chickpea (Cicer arietinum L.): Effects on quantitative and qualitative
components of seeds. Journal Agronomy of Crop Science 194: 457-464.
196. Dwivedi, S.L., N. Puppala, H.D. Upadhyaya, N. Manivannan and S. Singh. 2008.
Developing a core collection of peanut specific to Valencia Market Type. Crop
Science 48: 625-632.
197. Aruna, R., D. Manohar Rao, S. Sivaramakrishnan, L.J. Reddy, P. Bramel and H.D.
Upadhyaya. 2008. Efficiency of three DNA markers in revealing genetic variation
among wild Cajanus species. Plant Genetic Resources: Characterization and
utilization 7(2): 113-121.
198. Upadhyaya, H.D., R.P.S. Pundir, C.L.L. Gowda, V.G. Reddy and Sube Singh. 2008.
Establishing a core collection of foxtail millet to enhance utilization of germplasm of
an underutilized crop. Plant Genetic Resources; Characterization and utilization
7:177-184.
199. Jiang, Hui-Fang, Xiao-Ping, Ren, Bo-Shou, Liao, Jia-Quan, Huang, Yong, Lei, Ben-
Yin, Chen, B.Z. Guo, C.C. Holbrook and H.D. Upadhyaya. 2008. Development of a
core collection of peanut germplasm in China and comparison with an ICRISAT
peanut mini core collection. Acta Agronomica Sinica 34:25-30.
200. Sreelatha, E., C.L.L. Gowda, T.B. Gour, H.C. Sharma, S. Ramesh and H.D.
Upadhyaya. 2008 Genetic analysis of pod borer (Helicoverpa armigera) resistance
and grain yield in desi and kabuli chickpeas (Cicer arietinum) under unprotected
conditions. Indian Journal Genet and Plant breeding 68: 406-413.
201. Upadhyaya, H.D., C.L.L. Gowda and D.V.S.S.R. Sastry. 2008. Plant genetic
resources management: collection, characterization, conservation and utilization.
SAT eJournal 6.
202. Upadhyaya, H.D. 2008. Crop Germplasm and wild relatives: a source of novel
variation for crop improvement. Korean J Crop Science 53: 12-17.
203. Kashiwagi, J., L. Krishnamurthy, H.D. Upadhyaya and P.M. Gaur. 2008. Rapid
screening technique for canopy temperature status and its relevance to drought
tolerance improvement in chickpea. SAT eJournal 6.
204. Sastry, D.V.S.S.R., H.D. Upadhyaya and C.L.L. Gowda. 2008. Seed viability of
active collections in ex-situ genebanks: an analysis of sorghum germplasm
conserved at ICRISAT Genebank. SAT eJournal 6.
2007
205. Vadez, V., L. Krishnamurthy, R. Serraj, P.M. Gaur, H.D. Upadhyaya, D.A.
Hoisington, R.K. Varshney, N.C. Turner and K.H.M. Siddique. 2007. Large variation
for salinity tolerance in chickpea is explained by differences in sensitivity at
reproductive stages. Field Crops Research 104:123-129.
206. Upadhyaya, H.D., S.L. Dwivedi, C.L.L. Gowda, and S. Singh. 2007. Identification of
diverse germplasm lines for agronomic traits in a chickpea (Cicer arietinum L.) core
collection for use in crop improvement. Field Crops Res. 100:320326.
207. Nayyar, H., G. Kaur, S. Kumar, and H.D. Upadhyaya. 2007. Low temperature
effects during seed filling on chickpea genotypes (Cicer arietinum L.): Probing
mechanisms affecting seed reserves and yield. J. Agron. Crop Science 193:336
344.
208. Upadhyaya, H.D., P.M. Salimath, C.L.L. Gowda, and S. Singh. 2007. New early-
maturing germplasm lines for utilization in chickpea improvement. Euphytica
157:195208.
209. Aruna, R., M. Rao, L.J. Reddy, S. Sivaramakrishna, and H.D. Upadhyaya. 2007.
Influence of pod maturity and level of domestication on biochemical components in
wild and cultivated pigeonpea (Cajanus cajan). Ann. Appl. Biol. 151:2532.
210. Manohar Rao, L.J. Reddy, S. Sivaramakrishna and H.D. Upadhyaya. 2007.
Biochemical components as influenced by pod maturity stage and the level of
domestication in pigeonpea. Annals Appl Biol. 151:25-32.
211. Upadhyaya, H.D., K.N. Reddy, C.L.L. Gowda and Sube Singh. 2007. Phenotypic
diversity in pigeonpea core collection. Genet. Resour. Crop Evol. 54:1167-1184.
212. Upadhyaya, H.D., K.N. Reddy, C.L.L. Gowda and S.N. Silim. 2007. Patterns of
diversity in pigeonpea (Cajanus cajan (L.) Millsp.) germplasm collected from
different elevations in Kenya. Genet. Resour. Crop Evol. 54:1787-1795.
213. Upadhyaya, H.D., K.N. Reddy, C.L.L. Gowda, M. Irshad Ahmed and Sube Singh.
2007. Agroecological patterns of diversity in pearl millet [Pennisetum glaucum (L.)
R. Br.] germplasm from India. Plant Genet. Resour. Characterization and utilization
20:178-185.
214. Mace E.S., W. Yuejin, L. Boshou, H.D. Upadhyaya, S. Chandra and J.H. Crouch.
2007. Simple sequence repeat (SSR)-based diversity analysis of groundnut (Arachis
hypogaea L.) germplasm resistant to bacterial wilt. Plant Genetic Resources:
Characterization and Utilization 5:27-36.
215. Upadhyaya, H.D., C.L.L. Gowda and K.N. Reddy. 2007. Indigenous food legumes
of Asia: germplasm conservation, diversity and utilization in crop improvement. Acta
Horticulturae 752:61-67.
216. Gowda, C.L.L., H.D. Upadhyaya and M.A. Ghaffar. 2007. Importance of under-
utilized indigenous legumes in Asia-Pacific region. Acta Horticulturae 752:95-98
217. Upadhyaya, H.D., C.L.L. Gowda and V. Gopal Reddy. 2007. Morphological diversity
in finger millet germplasm introduced from Southern and Eastern Africa. J. SAT.
Agri. Res. 3:
218. Khairwal, I.S., S.K. Yadav, K.N. Rai, H.D. Upadhyaya, D. Kachhawa, B. Nirwan, R.
Bhattacharjee, B.S. Rajpurohit, C.J. Dangaria and Srikant. 2007. Evaluation and
identification of promising pearl millet germplasm for grain and fodder traits. J. SAT.
Agri. Res 5 (1)
219. Reddy, V.G., H.D. Upadhyaya and C.L.L. Gowda. 2007. Morphological
characterization of Worlds proso millet germplasm collection. J. SAT. Agri. Res. 3 (1)
220. Upadhyaya, H.D., K.N. Reddy and C.L.L. Gowda. 2007. Pearl millet germplasm at
ICRISAT Genebank Status and impact. J. SAT. Agri. Res. 3 (1)
221. Upadhyaya, H.D., K.N. Reddy, D.V.S.S.R. Sastry and C.L.L. Gowda. 2007.
Identification of photoperiod insensitive sources in the world collection of pigeonpea
at ICRISAT. J. SAT. Agri. Res. 3:46-49
222. Kashiwagi, J., H.D. Upadhyaya, L. Krishnamurthy and S. Singh. 2007. Identification
of high-yielding large-seeded kabuli chickpeas with drought tolerance root traits. J.
SAT. Agri. Res. 3:14-15
223. Sastry, D.V.S.S.R., H.D. Upadhyaya and C.L.L. Gowda. 2007. Influence of seed size
in chickpea on moisture contents during seed drying. J. SAT. Agri. Res. 3:5-7.
224. Varshney, R.K., S. Nayak, B. Jayashree, K. Eshwar, H.D. Upadhyaya and D.A.
Hoisington. 2007. Development of cost-effective SNP assays for chickpea genome
analysis and breeding. J. SAT. Agri. Res. 3:29-31.
225. Alexander, G., D. Ravi, Ch. Ramakrishna Reddy, K.B. Saxena, J. Hanson, H.D.
Upadhyaya and M. Blummel. 2007. Forage yield and quality in pigeonpea germplasm
lines. J. SAT. Agri. Res. 3:53-55.
226. Mallikarjuna, N., H.C. Sharma and H.D. Upadhyaya. 2007. Exploitation of wild
relatives of pigeonpea and chickpea for resistance to Helicoverpa armigera. J. SAT.
Agri. Res. 3:59-62.
2006
227. Nayyar, H., S. Singh, S. Kaur, S. Kumar and H.D. Upadhyaya. 2006. Differential
sensitivity of Macrocarpa and microcarpa types of chickpea (Cicer arietinum L.) to
water stress: Association of contrasting stress response with oxidative injury.
Journal of Integrative Plant Biology 48:1318-1329.
228. Upadhyaya, H.D., L.J. Reddy, C.L.L. Gowda and Sube Singh. 2006. Identification of
diverse groundnut germplasm: Sources of early-maturity in a core collection. Field
Crops Research 97:261-271.
229. Pande, S., G. K. Kishore, H.D. Upadhyaya and J.N. Rao. 2006. Identification of
sources multiple disease resistance in mini-core collection of chickpea. Plant Disease
90:1214-1218.
230. Nayyar, H., S. Kaur, S. Smita and H.D. Upadhyaya. 2006. Differential sensitivity of
desi (small-seeded) and kabuli (bold-seeded) chickpea genotypes to water stress
during seed filling: Effects on accumulation of seed reserve and yield. Journal of the
Science of Food and Agriculture: 86:2076-2082.
231. Mace, E.S., D.T. Phong, H.D. Upadhyaya, S. Chandra and J.H. Crouch. 2006. SSR
analysis of cultivated groundnut (Arachis hypogaea L.) germplasm resistant to rust
and late leaf spot diseases. Euphytica 152:317-330.
232. Upadhyaya, H.D., Shiv Kumar, C.L.L. Gowda and Sube Singh. 2006. Two major
genes for seed size in chickpea (Cicer arietinum L.). Euphytica 147:311-315.
233. Upadhyaya, H.D., L.J. Reddy, C.L.L. Gowda, K.N. Reddy and Sube Singh. 2006.
Development of a mini core subset for enhanced and diversified utilization of
pigeonpea germplasm resources. Crop Science 46:2127-2132.
234. Upadhyaya, H.D., B.J. Furman, S.L. Dwivedi, S.M. Udupa, C.L.L. Gowda, M Baum,
J.H. Crouch, H.K. Buhariwalla and Sube Singh. 2006. Development of a composite
collection for mining germplasm possessing allelic variation for beneficial traits in
chickpea. Plant Genetic Resources: Characterization and Utilization 4:13-19.
235. Upadhyaya, H.D., C.L.L. Gowda, H.K. Buhariwalla and J.H. Crouch. 2006. Efficient
use of crop germplasm resources: identifying useful germplasm for crop improvement
through core and mini core collections and molecular marker approaches. Plant
Genetic Resources 4:25-35.
236. Gowda, C.L.L. and H.D. Upadhyaya. 2006. International crop germplasm exchange
at ICRISAT. Indian Journal Plant Genetic Resources 19:418:427.
237. Mallikarjuna Swamy, B.P., H.D. Upadhyaya and P.V. Kenchana Goudar. 2006.
Characterization of Asian core-collection of groundnut for morphological traits. Indian
J. Crop Science 1: 129-134.
238. Upadhyaya, H.D., C.J. Coyne, S. Singh, C.L.L. Gowda, N. Lalitha and F.J.
Muehlbauer. 2006. Identification of large-seeded high-yielding diverse kabuli
accessions in newly assembled germplasm. Journal of SAT Agricultural Research
2(1). Available online at
http://icrtest:8080/Journal/bioinformatics/v2i1/v2i1identification.pdf .
239. Gaur, P.M, S. Pande, H.D. Upadhyaya and B.V. Rao. 2006. Extra-large kabuli
chickpea with high resistance to fusarium wilt. Journal of SAT Agricultural Research
2 (1). Available online at
http://www.icrisat.org/Journal/cropimprovement/v2i1/v2i1extralargekabuli.pdf
240. Kashiwagi, J., L. Krishnamurthy, S, Singh, P.M. Gaur, H.D. Upadhyaya, J.D.S.
Panwar, P.S. Basu, O. Ito and S. Tobita. 2006. Relationships between transpiration
efficiency and carbon isotope discrimination in chickpea (C. arietinum L.). SAT
eJournal 2.
241. Namita Srivastava, V. Vadez, H.D. Upadhyaya and K.B. Saxena. 2006. Screening
for intra and inter specific variability for salinity tolerance in Pigeonpea (Cajanus cajan)
and its related wild species. Journal of SAT Agricultural Research 2(1). Available
online at http://icrtest:8080/Journal/crop improvement/v2i1/v2i1screeningfor.pdf
2005
242. Upadhyaya, H.D., B.P. Mallikarjuna Swamy, P.V. Kenchana Goudar, B.Y.
Kullaiswamy and S. Singh. 2005. Identification of diverse accessions of groundnut
through multienvironment evaluation of a core collection for Asia. Field Crops
Research 93:293-299.
243. Kashiwagi, J., L. Krishnamurthy, H.D. Upadhyaya, H. Krishna, S. Chandra, V.
Vadez and R. Serraj. 2005. Genetic variability of drought-avoidance root traits in the
mini-core germplasm collection of chickpea. Euphytica 146:213-222.
244. Gowda, C.L.L., S. Ramesh, S. Chandra and H.D. Upadhyaya. 2005. Genetic basis
of pod borer (Helicoverpa armigera) resistance and grain yield in desi and kabuli
chickpea (Cicer arietinum L.). Euphytica 145:199-214.
245. Aruna, R., D. M. Rao, L.J. Reddy, H.D. Upadhyaya, and H.C. Sharma. 2005.
Inheritance of trichomes and resistance to pod borer (Helicoverpa armigera) and
their association in interspecific crosses between cultivated pigeonpea (Cajanus
cajan L.) and its wild relative C. scarabaeides. Euphytica 145:247257
246. Upadhyaya, H.D. 2005. Variability for drought resistance related traits in the mini
core collection of peanut. Crop Science 45:1432-1440.
247. Reddy, L.J., H.D. Upadhyaya, C.L.L. Gowda, K. N. Reddy, S.Singh 2005.
Development of core collection in pigeonpea [Cajanus cajan (L) Millspaugh] using
geographic and qualitative morphological descriptors. Genetic Resources Crop
Evolution 52:1049-1056
248. Dwivedi, S.L., H.D. Upadhyaya and D.M. Hegde. 2005. Development of core
collection using geographical information and morphological descriptors in safflower
(Carthamus tinctorius L.) germplasm. Genetic Resources Crop Evolution 52:821-830.
249. Upadhyaya, H.D., R.P.S. Pundir, C.L.L. Gowda and Sube Singh. 2005. Geographical
patterns of diversity for qualitative and quantitative traits in the pigeonpea germplasm
collection. Plant Genetic Resources- Characterization and Utilization 3:331-352.
2003
250. Mallikarjuna Swamy, B.P., H.D. Upadhyaya, P.V. Kenchana Goudar, B. Y.

Kullaiswamy and S. Singh. 2003. Phenotypic variation for agronomic characteristics
in a groundnut core collection for Asia. Field Crops Research 84:359-371.
251. Upadhyaya, H.D. 2003. Geographical patterns of variation for morphological and
agronomic characteristics in the chickpea germplasm collection. Euphytica 132:343-
352.
252. Upadhyaya, H.D. 2003. Phenotypic diversity in groundnut (Arachis hypogaea L.) core
collection assessed by morphological and agronomical evaluations. Genetic
Resources and Crop Evolution 50:539-550.
253. Upadhyaya, H.D., R. Ortiz, P.J. Bramel and Sube Singh. 2003. Development of a
groundnut core collection using taxonomical, geographical and morphological
descriptors. Genetic Resources and Crop Evolution. 50:139-148.
254. Thakur, R.P., V.P. Rao, H.D. Upadhyaya, S.N. Nigam and H.S. Talwar. 2003.
Improved screening techniques for in-vitro seed colonization and preharvest seed
infection by Aspergillus flavus in groundnut. Indian Journal Plant Protection 31:54-60.
2002
255. Upadhyaya, H.D., P.J. Bramel, R. Ortiz and Sube Singh. 2002. Geographical pattern
of diversity for morphological and agronomic traits in the groundnut germplasm
collection. Euphytica 128:191-204.
256. Upadhyaya, H.D., R. Ortiz, P.J. Bramel-Cox and S. Singh. 2002. Phenotypic diversity
for morphological and agronomic characteristics in chickpea core collection.
Euphytica 123: 333-342.
257. Upadhyaya, H.D., P.J. Bramel, R. Ortiz and Sube Singh. 2002. Developing a mini
core of peanut for utilization of genetic resources. Crop Science 42: 2150-2156.
258. Upadhyaya, H.D., S.N. Nigam, A.G.S. Reddy and N. Yellaiah. 2002. Registration of
early-maturing, rust, late leaf spot and low temperature tolerant peanut germplasm
line ICGV 92267. Crop Science 42: 2220-2221.
early-maturing peanut germplasm ICGV 93382. Crop Science 42: 2221.
2001
260. Upadhyaya, H.D. and R. Ortiz. 2001. A mini core subset for capturing diversity and
promoting utilization of chickpea genetic resources in crop improvement. Theor. Appl.
Genet. 102:1292-1298.
261. Nigam, S.N., H.D. Upadhyaya, S. Chandra, R.C. Nageswara Rao, G.C. Wright, and
A.G.S. Reddy. 2001. Gene effects for specific leaf area and harvest index in three
crosses of groundnut (Arachis hypogaea). Annals of Applied Biology 139:301306.
262. Upadhyaya, H.D., S.N. Nigam, V.K. Mehan, A.G.S. Reddy and N. Yellaiah. 2001.
Registration of Aspergillus flavus seed infection resistant peanut germplasm ICGV
91278, ICGV 91283 and ICGV 91284. Crop Science 41:599-600.
263. Upadhyaya, H.D., P.J. Bramel and Sube Singh. 2001. Development of a chickpea
core subset using geographic distribution and quantitative traits. Crop Science 41:
206-210.
)
264. Upadhyaya, H.D., S.N. Nigam, S. Pande, A.G.S. Reddy and N. Yellaiah. 2001.
Registration of an early-maturing moderately resistant to rust peanut germplasm
ICGV 94361. Crop Science 41: 598-599.
early-maturing fresh seed dormant peanut germplasm ICGV 93470. Crop Science 41:
597-598.
266. Pande, S., J. Narayan Rao, H.D. Upadhyaya and J.M. Lenne. 2001. Farmers
participatory integrated management of foliar diseases of groundnut. Int. J. Pest
Manag. 47: 121-126.
267. Upadhyaya, H.D., M.E. Ferguson and P.J. Bramel 2001. Status of the Arachis
germplasm collection at ICRISAT. Peanut Science 28: 89-96
268. Upadhyaya, H.D., S.N. Nigam and Sube Singh. 2001. Evaluation of groundnut core
collections to identify sources of tolerance to low temperature at germination. Indian
Journal of Plant Genetic Resources 14:165-167.
1999
269. Upadhyaya, H.D. and S.N. Nigam. 1999. Detection of epistasis for protein and oil
contents and oil quality parameters in peanut. Crop Science 39: 115-118.
270. Upadhyaya, H.D. and S.N. Nigam. 1999. Inheritance of fresh seed dormancy in
peanut. Crop Science 39: 98-101.
271. Gadag, R.N., H.D. Upadhyaya and J.V. Goud. 1999. Genetic analysis of yield,
protein, oil and other related traits in soybean. The Indian Journal of Genetics and
Plant Breeding 59: 487-492.
1998
272. Upadhyaya, H.D., Upadhyaya, H.D., S.N. Nigam, M.J.V. Rao, A.G.S. Reddy, N.
Yellaiah, and N.S. Reddy. 1998. Registration of early-maturing peanut germplasm
ICGV 92196, ICGV 92206, ICGV 92234 and ICGV 92243. Crop Science 38:900901.
273. Upadhyaya, H.D. and S.N. Nigam. 1998. Epistasis for vegetative and reproductive
traits in peanut. Crop Science 38: 44-49.
1997
274. Upadhyaya, H.D. and S.N. Nigam.1996. Identification and inheritance of male sterility
in groundnut (Arachis hypogaea L.). Euphytica 88: 227-230.
275. Upadhyaya, H.D., S.N. Nigam, M.J. Vasudeva Rao, N.S. Reddy, N. Yellaiah and
A.G.S. Reddy. 1997. Registration of ICGV 86143 peanut germplasm. Crop Science
37: 1986
276. Upadhyaya, H.D., S.N. Nigam, M.J. Vasudeva Rao, A.G.S. Reddy, N. Yellaiah and
N.S. Reddy. 1997. Registration of five spanish peanut germplasm lines with fresh
seed dormancy. Crop Science 37: 1027.
1996
277. Dharamraj, P.S., H.D. Upadhyaya, V.K. Deshpande, B.S. Sarala, and V.B. Naragund.
1996. R 8808 A high yielding peanut bud necrosis tolerant groundnut variety.
Journal of Oilseeds Research. 13:111112.
1995
278. Nigam, S.N., M.J.V. Rao, H.D. Upadhyaya, Y.L.C. Rao, and N.S. Reddy. 1995.
Registration of an early-maturing peanut germplasm ICGV 86015. Crop Science
35:17181719.
279. Rao, M.J.V., H.D. Upadhyaya, V.K. Mehan, S.N. Nigam, D. McDonald, and N.S.
Reddy. 1995. Registration of peanut germplasm ICGV 88145 and ICGV 89104
resistant to seed infection by Aspergillus flavus. Crop Science. 35:1717
280. Gadag, R.N., and H.D. Upadhyaya. 1995. Heterosis in soybean (Glycine max (L.)
Merrill). Indian Journal of Genetics and Plant Breeding, 55 (3). pp. 308-314
281. Upadhyaya, H.D. and K. Gopal. 1995. Inheritance of albinism in certain crosses of
groundnut (Arachis hypogaea L.). Journal of Oilseeds Research 12: 167-170.
1994
282. Upadhyaya, H.D. and S.N. Nigam. 1994. Inheritance of two components of early
maturity in groundnut (Arachis hypogaea L.). Euphytica 78: 59-67.
1993
283. Vijayakumar, S., K. Gopal, R.L. Ravikumar and H.D. Upadhyaya. 1993. Induced
mutations for higher yield in groundnut (Arachis hypogaea). Indian Journal of
Agricultural Sciences 63: 716-718.
284. Upadhyaya, H.D. and K. Gopal. 1993. Gamma-ray induced variability for some
quantitative characters in groundnut. Journal of Oilseed Research 10(1): 153-155.
285. Gopal, K., K.S. Ravi and H.D. Upadhyaya. 1993. Evaluation of soybean genotypes
against major diseases. Plant Protection Bulletin 45: 17-18.
1992
286. Gopal, K., H.D. Upadhyaya, M.S. Kulkarni and S.K. Jayalaxmi.1992. Reaction of
some gingerly genotypes to powdery mildew. Current Research 21: 90-91.
287. Upadhyaya, H.D., K. Gopal, H.L. Nadaf, and S. Vijayakumar. 1992. Combining ability
studies for yield and its components in groundnut. Indian Journal of Genetics and
Plant Breeding 52:16
1991
288. Gopal, K., K. Seetharama Reddy, H.D. Upadhyaya and D. Rajaram Reddy. 1991.
Host range of sugarcane mosaic virus (SCMV-B) from Rayalaseema, India, Ind. J. of
Virology 7: 117119.
289. Gopal, K. and H.D. Upadhyaya. 1991. Effect of bud necrosis disease on the yield of
groundnut under field condition. Indian Journal of Phytopathology 44(2): 221223.
1990
290. Gadag R.N., H.D. Upadhyaya and J.V. Goud. 1990. Studies on harvest Index in
soybean. Legume Research 13: 193196.
1987
291. Upadhyaya, H.D., B.B. Singh and K.P.S. Chauhan. 1987. Induced polygenic
variability in soybean. Journal of Nuclear Agriculture and Biology 16: 120126.
(Impact Factor NA, Cited 0)
292. Upadhyaya, H.D. 1985. Induced genetic variability for oil content in soybean. Journal
of Nuclear Agriculture and Biology 14: 119120.
1983
293. Upadhyaya, H.D., M.P. Haware, J. Kumar, and J.B. Smithson. 1983. Resistance to
wilt in chickpea. I. Inheritance of late wilting in response to race 1. Euphytica 32:447
452.
294. Upadhyaya, H.D., J.B. Smithson, M.P. Haware, and J. Kumar. 1983. Resistance to
wilt in chickpea. II. Further evidence for two genes for resistance to race 1. Euphytica
32:749755.
295. Upadhyaya, H.D. and B.B. Singh. 1979. Induced variability in soybean. Indian J.
Genet. & Plant Breeding 39:207209.
Electronic Journal articles (4)
296. Upadhyaya, H.D., C.J. Coyne, S. Singh, C.L.L. Gowda, N. Lalitha and F.J.
Muehlbauer. 2006. Identification of large-seeded high-yielding diverse kabuli
accessions in newly assembled germplasm. Journal of SAT Agricultural Research
2(1). Available online at
http://icrtest:8080/Journal/bioinformatics/v2i1/v2i1identification.pdf.
297. Gaur, P.M, S. Pande, H.D. Upadhyaya and B.V. Rao. 2006. Extra-large kabuli
chickpea with high resistance to fusarium wilt. Journal of SAT Agricultural Research
2 (1). Available online at
http://www.icrisat.org/Journal/cropimprovement/v2i1/v2i1extralargekabuli.pdf
298. Kashiwagi, J., L. Krishnamurthy, S, Singh, P.M. Gaur, H.D. Upadhyaya, J.D.S.
Panwar, P.S. Basu, O. Ito and S. Tobita. 2006. Relationships between transpiration
efficiency and carbon isotope discrimination in chickpea (C. arietinum L.). SAT
eJournal2.
299. Namita Srivastava, V. Vadez, H.D. Upadhyaya and K.B. Saxena. 2006. Screening
for intra and inter specific variability for salinity tolerance in Pigeonpea (Cajanus cajan)
and its related wild species. Journal of SAT Agricultural Research 2(1).
http://icrtest:8080/Journal/ crop improvement/ v2i1/ v2i1screeningfor.pdf
Review Articles (19)
2017
300. Yadav OP, H. D. Upadhyaya, KN Reddy, AK Jukanti, Sushil Pandey and RK Tyagi.
2017. Genetic Resources of Pearl Millet: Status and Utilization. Indian Journal of
Plant Genetic Resources
2016
301. Dwivedi SL, Salvatore C, Blair MW, H.D. Upadhyaya, Ashok Kumar A and Ortiz.2016.
Landrace germplasm for improving yield and abiotic stress adaptation. Trends in Plant
Science. http://dx.doi.org/10.1016/j.tplants.2015.10.012
302. Dwivedi, S.L., H.D. Upadhyaya, I.-M. Chung, De Vita, Pasquale, S. Garcia-Lara, D.
Guajardo-Flores, J.A. Gutirrez-Uribe, S.R.O.S. Saldvar, G. Rajakumar, K.L.
Sahrawat, J. Kumar, and R. Ortiz. 2016. Exploiting phenylpropanoid derivatives to
enhance the nutraceutical values of cereals and legumes. Frontiers in Plant Science.
doi: 10.3389/fpls.2016.00763
2015
303. Dwivedi SL, Anne B Britt, Tripathi L, Sharma S, H.D. Upadhyaya and Ortiz R. 2015.
Haploids: constraints and opportunities in plant breeding. Biotechnology Advances.
33:812-829. http://dx.doi.org/10.1016/j.biotechadv.2015.07.001
304. Dwivedi SL, Sahrawat KL, HD Upadhyaya, Mengoni A, Galardini M, Bazzicalupo M,
Biondi EG, Hungria M, Kaschuk MG, Blair MW and Ortiz R. 2015. Advances in host
plant and rhizobium genomics to enhance symbiotic nitrogen fixation in grain legumes.
Advances in Agronomy, 129. 01-116. ISSN 0065-2113
305. Kashiwagi J, Krishnamurthy L, Purushothaman R, HD Upadhyaya, Gaur PM, Gowda

CLL, Ito O and Varshney RK. 2015. Scope for improvement of root traits in chickpea
(Cicer arietinum L.) for better yield stability under drought. Field Crops Research.
170:47-54.
306. Sood S, Khulbe R, Gupta A, Agrawal PK, HD Upadhyaya and Bhatt JC. 2015.
Barnyard millet- a potential food and feed crop of future. Plant Breeding 134, 135
147.
307. Upadhyaya HD. Establishing core collections for enhanced use of germplasm in crop
improvement. 2015. Ekin Journal of Crop Breeding and Genetics 1-1: 1-12.
2013
308. Dwivedi, S.L., K.L. Sahrawat, H.D. Upadhyaya and R. Ortiz. 2013. Food, Nutrition
and Agro-Biodiversity under Global Climate Change. Advances in Agronomy 120:
1-128; http://dx.doi.org/10.1016/B978-0-12-407686-0.00001-4
309. Sharma, S., H.D. Upadhyaya, R.K. Varshney and C.L.L. Gowda. 2013. Pre-breeding
for diversification of primary gene pool and genetic enhancement of grain legumes.
Frontiers in Plant Science | doi: 10.3389/fpls.2013.00309
2012
310. Pandey, M.K., E. Monyo, P. Ozias-Akins, X. Liang , P. Guimares, S.N. Nigam, H.D.
Upadhyaya, P. Janila , X. Zhang, B. Guo, D.R. Cook, D.J. Bertioli , R. Michelmore,
R.K. Varshney. 2012. Advances in Arachis genomics for peanut improvement.
Biotechnology Advances 30 639651.
311. Dwivedi, S.L., H.D. Upadhyaya, S. Senthilvel, C.T. Hash, K. Fukunaga, X. Diao,
D. Santra, D. Baltensperger and M. Prasad. 2012. Millets: Genetic and Genomic
Resources. Plant Breeding Reviews 35: 247-375.
2011
312. Mallikarjuna, N., S. Senthivel, D.R. Jadhav, K.B. Saxena, H.C. Sharma, H.D.
Upadhyaya, A. Rathore and R.K. Varshney. 2011. Progress in utilization of Cajanus
platycarpus (Benth.) Maesen in pigeonpea improvement. Plant Breeding 130, 507
514.
2010
313. Divakara, B.N., H.D. Upadhyaya, S.P. Wani and C.L. Laxmipathi Gowda. 2010.
Biology and genetics improvement of Jatropha curcas L: A review. Applied Energy
87:732-742
314. Dwivedi, S.L., E. Perotti, H.D. Upadhyaya and R. Ortiz. 2010. Sexual and apomictic
plant reproduction in the genomics era: Exploring the mechanisms potentially useful
in crop plants Sexual Plant Reproduction. DOI 10.1007/s00497-010-0144-x
315. Abhishek, B., R.K. Varshney, N. Mallikarjuna, K.B. Saxena, H.D. Upadhyaya, V.
Isabel. 2010. Harnessing the potential of crop wild relatives through genomics tools
for pigeonpea improvement. Journal of Plant Biology 37: 85-100.
2009
316. Dwivedi, S.L., H.D. Upadhyaya, C. Gehring, P. Subudhi, V. Bajic and R. Ortiz. 2009.
Enhancing abiotic stress tolerance in cereals through breeding and transgenic
interventions. Plant Breeding Reviews 33:31-114.
2008
317. Dwivedi, S.L., H.D. Upadhyaya, H.T. Stalker, D. Bertioli, S. Nielsen, R. Ortiz and M.W.
Blair. 2008. Enhancing crop gene pools with beneficial traits using wild relatives. Plant
Breeding Reviews 30: 179- 230.
2007
318. Dwivedi, S.L., J.H. Crouch, D.J. Mackill, Y. Xu, M.W. Blair, M. Ragot, H.D.
Upadhyaya and R. Ortiz. 2007. The Molecularization of public sector crop breeding:
Progress, problems and Prospects. Advances in Agronomy 95:163-318.
2006
319. Dwivedi, S.L., M.W. Blair, H.D. Upadhyaya, R. Serraj, J. Balaji, H.K. Buhariwalla, R.
Ortiz and J.H. Crouch. 2006. Using genomics to exploit grain legume biodiversity in
crop improvement. Plant Breeding Reviews 26:171-358.
Manuscripts communicated
320. Khedikar Yogendra; Manish K Pandey; Sujay V; Sarvamangala Cholin; Spurthi N

Nayak; Ganapati Mukri; Vanika Garg; Hari D Upadhyaya; H L Nadaf; M VC
Gowda; Ramesh S. Bhat Rajeev K Varshney 2017. Identification of main-effect
and epistatic quantitative trait loci for m orphological and yield related traits in
peanut (Arachis hypogaea L.)". Mole
321. Upadhyaya. H. D. Cropping harsh environments: insights from the pearl millet
genome. 2017. Nature Biotechnology
322. Swarup Parida, , Upadhyaya HD, Rajendra Kumar; Bajaj D, Srivastava R, Tripathi
S, Bharadwaj C, Tyagi AK,. Delineation of potential molecular tags governing
flowering time in chickpea. 2017. Frontiers in Plant Science, section Crop Science
and Horticulture.
323. Bajaj D, Srivastava R Upadhyaya HD, Rajendra Kumar Tripathi S, Bharadwaj C,
Tyagi AK, Parida SK . Genome-wide generation and genotyping of informative
SNPs to scan molecular signatures for seed yield in chickpea. Molecular Biology
Reporter.
324. Upadhyaya, HD,K N Reddy, M Vetriventhan, Murali Krishna Gumma, M Irshad
Ahmed, Eric Manyasa, Thimma Reddy M, Shailesh Kumar Singh. 2016. Status,
gaps and genetic diversity in the world collection of sorghum from East Africa
conserved at ICRISAT genebank. Biodiversity and Conservation, Springer.
325. Muthusamy Ramakrishnan; S Antony Ceasar; K K Vinod; V Duraipandiyan; T.P
Ajeesh Krishn; Hari D Upadhyaya; N. A. Al-Dhabi; S Ignacimuthu, Identification of
putative QTLs for seedling stage phosphorus starvation response in finger millet
(Eleusine coracana L. Gaertn.) by association mapping and cross species synteny
analysis". PLOSone
326. R.A. Opole, P.V.V. Prasad, M. Djanaguiraman, M.B. Kirkham, and H.D.
Upadhyaya. 2017. Thresholds, Sensitive Stages and Genetic Variability of Finger
Millet to High Temperature Stress. Journal of Agronomy and Crop Science.
327. Stanislaus Antony Ceasar, Muthusamy Ramakrishnan, H. D. Upadhyaya, Michael
H. Wilson, Alison Baker, and Savarimuthu Ignacimuthu. 2016. Foxtail millet
genotypes display diverse phenotypic responses to low phosphate stress in
greenhouse and field conditions. Journal of Experimental Botany.
328. Upadhyaya, H.D., KN Reddy, M Vetriventhan, G Murali Krishna, M Irshad
Ahmed, M Thimma Reddy and Shailesh Kumar Singh. 2016. Geographical
distribution, diversity and gap analysis of East African sorghum collection
conserved at the ICRISAT genebank (Submitted to Australian J Crop Science-
reviewed)
329. Upadhyaya, H.D., Reddy, K.N., Mani, Vetriventhan, Ahmed, Irshad, Gumma,
Murali Krishna, M, Thimma Reddy, Singh, Shilesh Kumar. 2017. Geographical
Gaps and Diversity in Sorghum Germplasm from West and Central Africa
Conserved at ICRISAT Genebank. Crop Journal.
330. Dwivedi SL, Edith Lammerts van Bueren, Ceccarelli S, Grando S, H.D.
Upadhyaya and Rodomiro Ortiz. 2016. Agriculture, Environment, Nutrition and
Human Health. Trends in Plant Science. (Under review)
331. Srivastava R, H.D. Upadhyaya Bajaj D, Tripathi S, Bharadwaj C, Tyagi AK, Parida
SK. GWAS for seed weight and pod/seed number in 365 association panel. Plant
Physiology.
332. Thakro V, H.D. Upadhyaya Srivastava R, Bajaj D, Tripathi S, Bharadwaj C, Tyagi
AK, Parida SK). GWAS for 112 AYT lines. New Phytologist/Plant Physiology.
333. Basu U, H.D. Upadhyaya Srivastava R, Bajaj D, , Tripathi S, Bharadwaj C, Tyagi
AK, Parida SK. Expressed QTL-seq mapping DNA Research.
334. Laxmi, H.D. Upadhyaya Srivastava R, Bajaj D, Tripathi S, Bharadwaj C, Tyagi AK,
Parida SK . WUSCHEL gene family for shoot apical meristem development and
regulating yield traits DNA Research
335. Rodomiro Ortiz and H.D. Upadhyaya. 2016. Genetic Resources: From Mendels
peas to underutilized legume species. A special issue of Legume Perspectives
magazine (LP14). (Under review)
336. Shimray PW, Deepak Bajaj, Rishi Srivastava, H.D. Upadhyaya Rajendra Kumar,
Chellapilla Bharadwaj, Swarup Kumar Parida. 2017 Identifying transcription factor
genes associated with yield traits in chickpea. Plant Molecular Biology Reporter
(Minor Review).
337. Bulent Uzun, Engin YOL, Seymus Furat, H.D. Upadhyaya. 2016. Characterization
of groundnut (Arachis hypogaea L.) germplasm collection using quantitative and
qualitative traits in Mediterranean basin. Field Crops Research (Under Review)
338. Upadhyaya, H.D., Deepak Bajaj, Shailesh Tripathi, Bharadwaj C, Swarup Parida.
2016. Genetic dissection of plant growth habit in chickpea. (Molecular Genetics and
Genomics Springer Under review
339. B. Kalyana Babu, Salej Sood, Dinesh Kumar, Anjeli Joshi, Lakshmi Kant, H.D.
Upadhyaya and A. Pattanayak Cross-genera Transferability of Rice and Finger
millet Genomic SSRs to Barnyard millet (Echinochloa spp.) for genomics
applications and diversity analysis. (Under review)
340. Bharathi A, H.D. Upadhyaya, Gowda CLL, Varshney RK. 2016. Genotypic diversity
and population structure in composite collection of finger millet [Eleusine coracana
(L.) Gaertn]". Genetic Resources and Crop Evolution. (Under Review).
341. Achieving sustainable cultivation of sorghum (Ed. Prof. William Rooney) -
CH06-Ensuring the genetic diversity of sorghum
Manual (1)
342. Upadhyaya, H.D. and C.L.L. Gowda. 2009. Managing and enhancing use of
germplasm- strategies and methodologies. Technical manual no 10 Patancheru
502324 andhra Pradesh, India: International Crops Research Institute for the Semi-
Arid Tropics. 236pp.
Information Bulletin (2)
343. Upadhyaya, H.D., R.P.S. Pundir, S.L. Dwivedi and C.L.L. Gowda. 2009. Mini Core
Collections for Efficient Utilization of Plant Genetic Resources in Crop Improvement
Programs. Information Bulletins no 78 Patancheru 502324 Andhra Pradesh, India:
International Crops Research Institute for the Semi-Arid Tropics. 52pp..ISBN 978-92-
9066-519-9 Order code IBE 078.
344. Pande, S, H.D. Upadhyaya. Narayna Rao, L. Lakshmi Reddy and P. Parhasarathy
Rao. 2005. Promotion of integrated disease management of ICGV 91114, a dual
purpose groundnut variety for rainfed areas. Information Bulletin No. 68. Patancheru
502 324 andhra Pradesh, India: International Crops Research Institute for the Semi-
Arid Tropics. 28 pp.
Books (3)
345. Mohar Singh and H. D. Upadhyaya (Eds) 2015. Genetic and Genomic Resources
for Grain Cereals Improvement. Elsevier Science Publishing Company
Incorporated. 384 pages. (ISBN: 978-0-12-802000-5)
346. Genetics, Genomics and Breeding of Sorghum. 2014. Pages 366 In: Yi-Hong
Wang, H.D. Upadhyaya and Chittaranjan Kole eds. Taylor & Francis
Group, LLC, CRC Press 2014 Cat/ISBN: K21635/9781482210088
347. Genetic and genomic resources of grain legume Improvement. 2013. Pages 302
In Singh M., H.D. Upadhyaya and I.S. Bisht eds. Elsevier; 32 Jamestown Road,
London NW1 7BY, UK; 225 Wyman Street, Waltham, MA 02451, USA. ISBN:
978-0-12-397935-3.
Book chapters (37)
348. Upadhyaya, H D, Mani Vetriventhan, and Santosh Deshpande. 2016.

Sorghum Germplasm Resources Characterization and Trait Mapping. In book:
The Sorghum Genome: In Sujay Rakshit, Yi-Hong Wang (Eds). Compendium of
Plant Genomes. DOI: 10.1007/978-3-319-47789-3. ISBN 978-3-319-47787-9
Series ISSN 2199-4781
349. Upadhyaya, H.D., S.L. Dwivedi, Y.-H. Wang, and M. Vetriventhan. 2016.
Sorghum genetic resources. In book: Sorghum: State of the Art and Future
Perspectives. In: Vara Prasad, Ignacio Ciampitti (Eds.). American Society of
Agronomy and the Crop Science Society of America.
doi:10.2134/agronmonogr58.2014.0056.5.
350. Barkley, N.A., H.D. Upadhyaya, L. Boshou, and C.C. Holbrook. 2016. Global
resources of genetic diversity in peanut. Peanuts. http://dx.doi.org/10.1016/B978-
1-63067-038-2.00003-4. Peanuts, First Edition, 2016, 67-109.
351. Jean-Claude Rubyogo, Mula G Myer, Hakeem Ajeigbe, Alpha Kamara, Steven
Boahen,Robin Buruchara, Hari D Upadhyaya, Janila Pasupuleti, Patrick Okori,
Haile Desmae,Ousmane Boukar, Christian Fatokun, Ousmane Coulibaly, Clare
Mukhankusi, Steve Beebe,Pooran M Gaur, Ganga Rao NVPR, Chris Ojiewo,
Sameer Kumar CV, Hesham Agrama,Robin Buruchara, Steve Beebe, Omari
Mponda, Juma Mfaume, Phillipo Mashamba,Stephen Lyimo, Rose Ubwe, David K.
Okello, Yuventino Obong, Robert Kileo, Paul M Kimurto,Asnake Fikre, Million
Eshete, Justus Chintu, Geoffrey Kananji, Francis Maideni,Albert Chamango,
Virginia Chisale, Manuel Amane, Amade Muitia, Candidus Echekwu,Amos
Miningou, Nicholas Denwar, Ondie Kodio, Mamadou Tour, Haruna
Mohammed,Issa Drabo, Bruce Mutari, Goodwill Makunde, David Karanja, Sostene
Kweka, Michael Kilango,Magdalena Williams, Michael Ugen, Stanley Nkabulo,
Kidane Tumsa, Jandeka Mahasi,Frederick Baijukya and Emmanuel S
MonyoIntegrated seed systems delivering on the promise: experiences from
Tropical LegumesII. Pp 167-178. 2016. In book: Seven seasons of learning and
engaging smallholderfarmers in the drought-prone areas of sub-Saharan Africa and
South Asia through Tropical Legumes, 20072014, Publisher: ICRISAT, Editors:
ES Monyo and RK Varshney, pp.240
352. Sharma, S., H.D. Upadhyaya, M. Roorkiwal, and R.K. Varshney. 2016.
Interspecific hybridization for chickpea (Cicer arietinum L.) improvement. In book:
Polyploidy and Hybridization for Crop Improvement. In: Annaliese S. Manson
(Eds.). CRC Press. pp. 446471.
353. Ganesamurthy K, Nadaf HL, Venkataramana P, Manjurul Kadir M, Damodara
Parida,Manoj Kumar, Mudalagiriyappa, Konda CR, Somasekhar, Hasan Khan,
Kumara Charyulu D, Janila Pasupuleti, and H. D. Upadhyaya.Enhancing
groundnut productivity and production in Bangladesh and India. Seven seasons of
learning and engaging smallholderfarmers in the drought-prone areas of sub-
Saharan Africa and South Asia through Tropical Legumes, 20072014, Publisher:
ICRISAT, Editors: ES Monyo and RK Varshney, pp.240
354. Wang Y-H, H.D. Upadhyaya and Ismail Dweikat. 2015. Sorghum. In Mohar Singh
and H.D. Upadhyaya (Eds.), Genetic and Genomic Resources for Grain Cereals
Improvement. Academic Press, Elsevier. Pp. 227-251
355. Vetriventhan, M., H.D. Upadhyaya, S.L. Dwivedi, S.K. Pattanashetti, and S.K.
Singh. 2015. Finger and foxtail millets. In Mohar Singh and H.D. Upadhyaya (Eds.),
Genetic and Genomic Resources for Grain Cereals Improvement. Academic Press,
Elsevier. pp. 291319.
356. Upadhyaya, H.D., Vetriventhan M, Dwivedi SL, Pattanashetti SK, Singh SK. 2015.
Proso, little, barnyard, and kodo millet. In: Mohar Singh, H.D. Upadhyaya (Eds.),
Genetic and Genomic Resources for Grain Cereals Improvement. Elsevier
(Academic Press). pp. 321-343.
357. Pattanashetti SK, H.D. Upadhyaya, Dwivedi S, Vetriventhan M and Reddy KN.
2015. Pearl millet. In: Mohar Singh, H.D. Upadhyaya (Eds.), Genetic and Genomic
Resources for Grain Cereals Improvement. Elsevier (Academic Press). pp. 253-
289.
358. Srinivasa Rao, P., B.V.S. Reddy, N. Nagaraj and H.D. Upadhyaya. 2014 Sorghum
production for diversified uses. PP 1-27 In: Yi-Hong Wang, H.D. Upadhyaya and
Chittaranjan Kole (eds), Genetics, Genomics and Breeding of Sorghum, Taylor &
Francis Group, LLC, CRC Press 2014 Cat/ISBN: K21635/9781482210088.
359. Kamala, V., Moses Muraya, S.L. Dwivedi and H.D. Upadhyaya. 2014 Wild
Sorghums- Their Potential Use In Crop Improvement. PP 56-89 In: Yi-Hong Wang,
H.D. Upadhyaya and Chittaranjan Kole eds, Genetics, Genomics and Breeding
of Sorghum, Taylor & Francis Group, LLC, CRC Press 2014
Cat/ISBN: K21635/9781482210088.
360. Srinivasa Rao, P., B.V.S. Reddy, N. Nagaraj and H.D. Upadhyaya. 2014 Sorghum
production for diversified uses. PP 1-27 In: Yi-Hong Wang, H.D. Upadhyaya and
Chittaranjan Kole eds, Genetics, Genomics and Breeding of Sorghum, Taylor &
Francis Group, LLC, CRC Press 2014 Cat/ISBN: K21635/9781482210088
361. William, E., H.D. Upadhyaya and A.l. Malik. 2014. Salinity In: Michael Jackson,
Brian Ford-Lloyd and Martin Parry (eds.) Plant Genetic Resources and Climate
Change - a 21st Century Perspective. CABI International 2014. P 236-250.
362. Upadhyaya, H.D., S. Sharma and S.L. Dwivedi. 2014. Genetic Resources, diversity
and association mapping in peanut. P 13-36 In: Nalini Mallikarjuna N and Varshney
RK (eds.). Genetics, Genomics and Breeding of Peannuts, Science
Publishers/CRC Press, Boca Raton, FL, USA. P 250.
363. Singh M., H.D. Upadhyaya and I.S. Bisht. 2013. Introduction. Pages 1-10 in: Singh
M., H.D. Upadhyaya and I.S. Bisht (eds). Genetic and genomic resources of grain
legume Improvement. Elsevier; 32 Jamestown Road, London NW1 7BY, UK; 225
Wyman Street, Waltham, MA 02451, USA. ISBN: 978-0-12-397935-3.
364. Sharma, S., H.D. Upadhyaya, M. Roorkiwal, R. K. Varshney and C.L. Laxmipathi
Gowda. 2013. Chickpea. Pages 85-112 in: Singh M., H.D. Upadhyaya and I.S.
Bisht (eds). Genetic and genomic resources of grain legume Improvement.
Elsevier; 32 Jamestown Road, London NW1 7BY, UK; 225 Wyman Street,
Waltham, MA 02451, USA. ISBN: 978-0-12-397935-3.
365. Upadhyaya, H.D., S. Sharma, K.N. Reddy, R. Saxena, R. K. Varshney and C.L.
Laxmipathi Gowda. 2013. Pigeonpea. Pages 181-202 in: Singh M., H.D.
Upadhyaya and I.S. Bisht (eds). Genetic and genomic resources of grain legume
Improvement. Elsevier; 32 Jamestown Road, London NW1 7BY, UK; 225 Wyman
Street, Waltham, MA 02451, USA. ISBN:978-0-12-397935-3.
366. Sharma, H.C, C.L.L. Gowda, P.M. Gaur, N. Mallikarjuna, H.D. Upadhyaya, R.
Varshney and K.K. Sharma. 2013. Exploiting Host Plant Resistance for Pest
Management in Chickpea. In: Chickpea compendium.
367. Hay, F. R., N. R. S.Hamilton, B. J. Furman, H.D. Upadhyaya, K.N. Reddy, and S.K.
Singh. 2013. Cereals pp 293-315 In: Normah, M.N.; Chin, H.F.; Reed, Barbara M.
(Eds.) Conservation of Tropical Plant Species. 2013, XIV, 538 p. 18 illus., ISBN
978-1-4614-3775-8 http://www.springer.com/978-1-4614-3775-8.
368. Halewood, M., R. Sood, R.S. hamilton, A. Amri, Ines Van der Houwe, N. Roux, D.
Dumet, J. Hanson, H.D. Upadhyaya, A. Jorge and D. Tay. 2012. Changing rates
to acquisition of plant genetic resources by international gene banks: setting the
scene to monitor an impact of the international treaty. In: Michael Halewood, Isabel
Lopez Noriega, Selim Louafi (eds.). Crop Genetic Resources as a Global Commons
Challenges in International Law and Governance. Published November 12th 2012
by Routledge 424 pages. Series: Issues in Agricultural Biodiversity
http://grpi2.wordpress.com/2012/12/11/global-commons-book/.
369. Gaur, P.M., K.B. Saxena S.N. Nigam, B.V.S. Reddy, K.N. Rai, C.L.L. Gowda and
H.D. Upadhyaya. 2012. Plant breeding research at ICRISAT. In: Principles of Plant
Genetics and Breeding. 2nd Ed. Willey-Blackwell, pp. 560-564
370. Gowda, C.L.L., K.B. Saxena, R.K. Srivastava, H.D. Upadhyaya and S.N. Silim.
2012. Pigeonpea: From an orphan to a leader in food legumes. In Biodiversity in
Agriculture: Domestication, Evolution & Sustainability (P. Gepts, T. R. Famula, R.
L. Bettinger, S. B. Brush, A. B. Damania, P. E. McGuire and C. O. Qualset eds.).
University of California, Davis, USA: Cambridge University Press. ISBN-13:
9780521170871. P 361-373.
371. Upadhyaya H.D., Sharma Shivali and S.L. Dwivedi. 2011. Arachis In: Wild Crop
Relatives: Genomics and Breeding Resources, Legume Crops and Forages (Eds.
Chittaranjan Kole). Springer Publisher p 1-20.
372. Upadhyaya, H.D. and K.N. Reddy. 2010. Pearl millet germplasm collection,
conservation, characterization and utilization in crop improvement In. Pearl millet
Research and Development ed KN Rai, IS Khairwal and RP Thakur. (in press).
373. Vara Prasad P.V., K. Vijay Gopal and H.D. Upadhyaya. 2009. Growth and
production of groundnut in Soils, Plant Growth and Crop Production, [Ed. Willy H.
Verheye], in Encyclopedia of Life Support Systems (EOLSS), Developed under the
Auspices of the UNESCO, Eolss Publishers, Oxford, UK, [ http://www.eolss.net ]
pages 26.
374. Gowda, C.L.L., R. Serraj, G. Srinivasan, Y.S. Chauhan, B.V.S. Reddy, K.N. Rai,
P.M. Gaur, L.J. Reddy, S.L. Dwivedi, H.D. Upadhyaya, P.N. Zaidi, H.K. Rai, P.
Maniselva and N. Mallikarjuna. 2009. Opportunities for improving crop-water
productivity through genetic enhancement in dry land crops. Pages 133-163 in
Rainfed Agriculture: unlocking potential (Eds: SP Wani, Johan Rockstron and Theib
Oweis). CAB International.
375. Upadhyaya, H.D., S.L. Dwivedi, C.L.L. Gowda, S. Singh and K.N. Reddy. 2009.
Enhancing the value of plant genetic resources towards their global utilization in
improving the genetic potential of chickpea, pigeonpea and groundnut crops In:
Masood Ali et al. eds. Milestones in Food Legumes Research, IIPR Kanpur. Pp
178-205.
376. Upadhyaya, H.D., J. Kashiwagi, R.K. Varshney, P.M. Gaur, K.B. Saxen, L.
Krishnamurthy, C.L.L. Gowda, R.P.S. Pundir, S.K. Chaturvedi, P.S. Basu and I.P.
Singh. 2010. Phenotyping chickpeas and pigeonpeas for adaption to drought. In:
Ribaut JM and Monneveux P (eds) Drought phenotyping in crops: from theory to
practice. p 337-346.
377. Dwivedi, S.L., H.D. Upadhyaya and C.L.L. Gowda. 2009. Approaches to enhance
the value of genetic resources in crop improvement. In: Strengthening information
on Plant Genetic Resources in Asia, 2009, Bangkok, Thailand.
http://www.fao.org/docrep/014/am265e/am265e00.pdf
378. Ortiz, R., T. Ban, R. Bandyopadhyay, D. Bergvinson, K. Hell, B. James, D. Jaffers,
A. Mankir, J. Murakami, P. L. Kumar, S.N. Nigam, H.D. Upadhyaya and F. Waliyar.
2008. CGIAR research-for-development program on mycotoxins. Pages 415-424,
in Mycotoxins; detection methods, management, public health and agricultural
trade (J Leslie, R Bandyopadhyay and A. Visconti eds). CABI Publishing, UK.
379. Burow, M.D., M.G. Selvaraj, H.D. Upadhyaya, P. Ozais-Akins, B. Guo, D.J. Bertioli,
S. C. de Macedo Leal-Bertioli, M. de C. Moretzsohn and P.M. Guimaraes. 2008.
Genomics of Peanut, a Major Source of Oil and protein. Pages 421- 440 In
Genomics of Tropical Crops. (P.H Moore and R. Ming eds.).Springer, New York,
380. Dwivedi, S.L., D.J. Bertioli, J.H. Crouch, J.F. Valls, H.D. Upadhyaya, A. Favero, M.
Moretzsohn and A.H. Paterson. 2007. Peanut. Pages 117-151.Genome Mapping
and Moecular Breeding in Plants. Volume 2 Oilseeds (C. Kole. Ed.). Springer, Berlin
Heidelberg.
381. Redden, R.J., B.J. Furman, H.D. Upadhyaya, R.P.S. Pundir, C.L.L. Gowda, C.J.
Coyne and D. Enneking. 2007. Biodiversity management in chickpea. Pages 355-
368 in Chickpea breeding and management (S.S. Yadav, R.R. Redden, W. Chen,
B. Sharma eds.). Wallingford, Oxon, UK: CAB International. 638 pp.
382. Varshney, R.K., D.A. Hoisington, H.D. Upadhyaya, P.M. Gaur, S.N. Nigam, K.B.
Saxena, V. Vadez, S. Bhatia, R. Aruna, M.V.C. Gowda and N.K. Singh. 2007.
Molecular genetics and breeding of grain legume crops of semi-arid tropics. Pages
207-241. In Genomics Assisted Crop Improvement. Vol. 2 Genomics applications
in Crops. (Varshney, R.K. and Tuberosa R, eds.), Springer.
383. Vadez, V., C.T. Hash, S.M.H. Rizvi , F.R. Bidinger , K. Banttee, K.K. Sharma, J.M.
Devi, P. Bhatnagar-Mathur, J. Kashiwagi, L. Krishnamurthy, D. Hoisington, R.K.
Varshney, P.M. Gaur, S.N. Nigam, R. Aruna and H.D. Upadhyaya. 2007. The
scope of gene technology in improving drought tolerance in crops. P 323-334, In:
Serageldin I and E. Masood (eds.) Changing lives, Edition: 41, Publisher: Biblioteca
Alexandrina.
384. Gaur, P.M., K.B. Saxena , S.N. Nigam, B.V.S. Reddy, K.N. Rai, C.L.L. Gowda and
H.D. Upadhyaya. 2006. Plant Breeding Research at ICRISAT. Plant Breeding-
Principles of Plant Genetics and Breeding. G. Acquaah (ed.). Blackwell Publishing,
USA/Canada/Australia. 455-461.
Reports (4)
385. Karunakaran, K.R., C.P., Gracy, H. Lokesha, C. Bantilan, D. Kumara Charyulu,

P. Parthasarthy Rao, G.D. Nageswara Rao, M. Vaithiyaligan, H.L. Nadaf, P.
Venkataramana, H.D. Upadhyaya, P. Janila and K.C.P. Rao. 2013. Groundnut
baseline and early-adoption surveys in south Asia insights from TL-II (Phase-I)
Project: Synthesis Report 2013. Patancheru 502324, Andhra Pradesh, India:
International Crops Research Institute for the Semi-Arid Tropics. 104pp.
386. Horna, D., H.D. Upadhyaya, D.V.S.S.R. Sastry, V. Gopal Reddy, Sube Singh,
K.N. Reddy and C.L.L. Gowda. 2010. Conservation and management of genetic
resources of sorghum, pearl millet, chickpea, pigeonpea, groundnut and other
small millets in the ICRISAT genebank. P 44-45 In: Evaluating Cost-Effectiveness
of Collection Management: Ex-situ Conservation of Plant Genetic Resources in
CG System. Collective Action for Rehabilitation of Global Public Goods CGIAR
Genetic Resources System-Phase 2 (GPG2)
387. Horna, D., D. Debouck, D. Dumet, J. Hanson, V.M. Manyong, R. Sackville-
Hamilton, I. Sanchez, S. Taba, H.D. Upadhyaya, I. van den Houwe. 2010. Cost
Effectiveness of Germplasm Collections in the CG System. P 100-115. In:
Evaluating Cost-Effectiveness of Collection Management: Ex-situ Conservation
of Plant Genetic Resources in CG System. Collective Action for Rehabilitation of
Global Public Goods CGIAR Genetic Resources System-Phase 2 (GPG2)
388. Andy, J., H.D. Upadhyaya, C.L.L. Gowda, P.K. Agrawal, Sam Fujisaka and Ben
Anderson. 2008. Climate change and its effect on conservation and use of plant
genetic resources for food and agriculture and associated biodiversity for food
security. Report to FAO November 2008.
Web articles (31)
389. Upadhyaya, H.D., S. Sharma, C.L.L. Gowda, D. Sastry, Sube Singh, S. Sharma,
A. Amri, K. Street, N. Rukhkyan, G. Antalikova, S. Stoyanova, B. Redden, Brner.
2009. Conservation of chickpea genetic resources. Crop Genebank Knowledge
Base.
http://cropgenebank.sgrp.cgiar.org/index.php?option=com_content&view=article&i
d=247&Itemid=372&lang=english
2011. Registration of cultivated chickpea and wild relatives genetic resources. Crop
Genebank Knowledge Base.
2011. Sample processing of cultivated chickpea and wild relatives genetic
resources. Crop Genebank Knowledge Base.
2011. Viability of cultivated chickpea and wild relatives genetic resources. Crop
2011. Health diagnosis of cultivated chickpea and wild relatives. Crop Genebank
Knowledge Base.
2011. Storage of cultivated chickpea and wild relatives genetic resources. Crop
2011. Distribution of cultivated chickpea and wild relatives genetic resources. Crop
2011. Characterization of cultivated chickpea and wild relatives. Crop Genebank
Knowledge Base
2011. Safety duplication of cultivated chickpea and wild relative genetic
resources. Crop Genebank Knowledge Base.
398. Imtiaz, M., M.C. Kharkwal and H.D. Upadhyaya. 2009. Key access and utilization
descriptors for chickpea genetic resources. 2009.
http://docs.google.com/viewer?a=v&q=cache:GfyTrts5AooJ:www.bioversityinterna
tional.org/fileadmin/bioversity/publications/pdfs/1361_Key%2520access%2520an
d%2520utilization%2520descriptors%2520for%2520chickpea%2520genetic%252
0resources.pdf+chickpea+descriptor&hl=en&gl=in&pid=bl&srcid=ADGEESj3DVzo
wJNNfSzdIGViL0pPtWTOdqe4sOYCYgF_AMKqNVAqaBUXDBQRzOybex3hZtaf
7WhChAK1cRQb_e74AaMjS_kTrKOIH_W5gziAAF95tqn9a2KieE2db1UreiyhxRh
AzC0Q&sig=AHIEtbQGdYpNFNGdVossA0wRyYcESFy1hg.
399. Upadhyaya, H.D. 2002. Groundnut Mini core collection.
http://www.icrisat.org/what-we-do/crops/GroundNut/Project1/gnmncore.htm
400. Upadhyaya, H.D., F. Waliyar and S.N. Nigam 2002.Breeding groundnut for
resistance to aflatoxin contamination. http://www.icrisat.org/aflatoxin/breeding.asp
401. Upadhyaya, H.D. 2001. New Sources of Early-Maturity Identified in
Groundnut Core Collection.
http://www.icrisat.org/grep/homepage/grephomepage/archives/nsemgcc.ht
m
402. Upadhyaya, H.D. 2001. Development of Core Collection of groundnut to Enhance
Utilization of Genetic Resources in Crop Improvement.
http://www.icrisat.org/grep/homepage/grephomepage/archives/dccgeugr.htm
403. Upadhyaya, H.D. 2000. Core Collection of Chickpea as a Means to Enhance
Utilization of Genetic Resources in Crop Improvement.
http://www.icrisat.org/grep/homepage/grephomepage/archives/gr_chickpea.html
404. Upadhyaya, H.D. 2009. Mini Core collection of Chickpea.
http://www.icrisat.org/chickpea-genebank-minicore.htm
405. Upadhyaya, H.D. 2009. Composite collection of Chickpea.
http://www.icrisat.org/intranet/grep/homepage/genebanknew/chickpeacomposite.ht
m
406. Upadhyaya, H.D. 2009. Reference Set of Chickpea.
http://www.icrisat.org/chickpea-genebank-reference-set.htm
407. Upadhyaya, H.D. 2009. Mini Core collection of Sorghum.
http://www.icrisat.org/Sorghum-Mini-Core.htm
408. Upadhyaya, H.D. 2009. Reference Set of Sorghum. http://www.icrisat.org/crop-
sorghum-genebank-reference.htm
409. Upadhyaya, H.D. 2009. Mini Core collection of Pearl Millet.
http://www.icrisat.org/crop-pearlmillet-genebank-mini-core-collections.htm
410. Upadhyaya, H.D. 2009. Composite collection of Pearl Millet.
http://www.icrisat.org/intranet/grep/Homepage/Genebanknew/Pearlmilletcomposite.
htm
411. Upadhyaya, H.D. 2009. Reference Set of Pearl Millet. http://www.icrisat.org/crop-
pearlmillet-genebank-referenceset.htm
412. Upadhyaya, H.D. 2009. Mini Core collection of Pigeonpea.
http://www.icrisat.org/crop-pigeonpea-genebank-Mini-Core-Collection%20.htm
413. Upadhyaya, H.D. 2009. Composite collection of Pigeonpea.
http://www.icrisat.org/intranet/grep/Homepage/Genebanknew/Pigeonpeacomposite.
htm
414. Upadhyaya, H.D. 2009. Reference Set of Pigeonpea. http://www.icrisat.org/crop-
pigeonpea-genebank-Referenceset.htm
415. Upadhyaya, H.D. 2009. Mini Core collection of Groundnut.
http://www.icrisat.org/what-we-do/crops/GroundNut/Project1/gnmncore.htm
416. Upadhyaya, H.D. 2009. Composite collection of Groundnut.
http://www.icrisat.org/intranet/Grep/Homepage/Genebanknew/Groundnutcomposite
.htm
417. Upadhyaya, H.D. 2009. Reference Set of Groundnut. http://www.icrisat.org/crop-
groundnut-genebank-Referenceset.htm
418. Upadhyaya, H.D. 2009. Composite collection of Finger Millet.
http://www.icrisat.org/intranet/grep/homepage/Genebanknew/fingermilletcomposite.
htm
419. Upadhyaya, H.D. 2009. Composite collection of Foxtail Millet.
http://www.icrisat.org/intranet/grep/homepage/Genebanknew/foxmilletcomposite.ht
m
Conference Papers (256)
420. Mani Vetriventhan and H. D. Upadhyaya.Millet, Panicum sumatrense, An Under-

utilized Multipurpose Crop. Abstract presented in IAC-2016 New Delhi.
421. Dalamu, V. Kumar, V. Bhardwaj R. Kumar, R.P. Kaur, H. D. Upadhyaya and
Mohar Singh Developmentof Core Set of Indian Collection of Cultivated Potatoes
(Solanumtuberosum ssp. tuberosum) Abstract presented in IAC-2016 New Delhi.
422. Genomics of sorgoleone: Prospects for exploiting root exudates to breed
"greener" biofuels for a warming planet Santosh Deshpande, PhD (Plant
Breeding) - Special Project Scientist, Punna Ramu,Geoffrey Morris, Stephen
Kresovich, Edward Buckler, H.D Upadhyaya,Sharon Mitchell, Guntur Subbarao,
ASPB 2016.
423. Santosh K. Pattanashetti, H. D. Upadhyaya, Vinod Kumar and K. Narsimha
ReddyGenetic Variability for Nutritional Traits among Wild Relatives of Pearl
Millet
Conserved at ICRISAT Genebank
424. Conservation and utilization of Plant Genetic Resources: A Global Perspective.
C L Laxmipathi Gowda, Shivali Sharma and H. D. Upadhyaya. National
conference on genetics and cytogenetics 1-3, February, 2016 at University of
Agricultural Sciences, Dharwad, University of Agricultural sciences, Dharwad
and Dr. S.W.Mensinkai memorial education and research foundation (r)
425. Upadhyaya, H.D.,, Dwivedi SL, Dinkaran E, Kannan Bapu JR, Reddy KN,
Sharma S and Singh S. 2015. Nutritionally dense chickpea and pigeonpea
germplasm identified at ICRISAT. Abstract presented in ASA, CSSA, and SSSA
International Annual Meeting, "Synergy in Science: Partnering for Solutions,"
Nov. 15-18, 2015, in Minneapolis, MN.
426. Upadhyaya, H.D., and Dwivedi SL. 2015. Global Perspectives on Groundnut
Production, Trade, and Utilization: Constraints and Opportunities. PP1-10, Lead
paper In: National Seminar on Technologies for Enhancing Oilseeds Production
Through NMOOP, January 18-19, 2015, University Auditorium, PJTSAU,
Hyderabad, Telangana, India.
427. Upadhyaya, H.D.,. 2015. Plant genetic resources for climate smart crops and
human health. Abstract presented in ASA, CSSA, and SSSA International
Annual Meeting, "Synergy in Science: Partnering for Solutions," Nov. 15-18,
2015, in Minneapolis, MN.
428. Shivali Sharma, H.D. Upadhyaya and Rajeev K Varshney. 2015. Exploitation of
Wild Cicer Species for Enriching Genetic Variability for Chickpea Improvement.
Abstract presented in ASA, CSSA, and SSSA International Annual Meeting,
"Synergy in Science: Partnering for Solutions," Nov. 15-18, 2015, in Minneapolis,
MN.
429. Sharma Shivali, Sharma HC and H.D. Upadhyaya. 2015. Exploiting wild species
for developing insect-smart crops. Presented in XVIII International Plant
Protection Congress (IPPC), 24-27 August 2015, Berlin, Germany
430. Pattanashetti S K, H.D. Upadhyaya Motagi BN, Kanatti AA. 2015. Genetic
differences for iron absorption efficiency related traits in groundnut. In: 47th
Annual Meeting of APRES, July 14-16, Charleston, SC (USA)
431. Pattanashetti SK, H.D. Upadhyaya, Blummel M, Reddy KN, Ramanareddy Y,
Vinod Kumar and Singh S. 2015 Genetic variability in Napier grass (Pennisetum
purpureum) germplasm conserved at ICRISAT Genebank. In: XXIII International
Grasslands Congress, November 20-24, Delhi NCR
432. Omprakash KS, Pattanashetti SK and Biradar BD, Naidu GK, H.D. Upadhyaya,
Pandey M K and Varshney RK (2015) Response of groundnut mini core
collection to iron deficiency chlorosis. In: VIII International Conference on
Advances in Arachis genomics and Biotechnology, November 5-7, Brisbane,
Australia.
433. Naidu GK, Singh O, Biradar BD Pattanashetti SK, Vadez V, H. D. Upadhyaya,
and Varshney R K (2015) Effect of calcareous soils on the productivity
parameters in groundnut RIL population. Page 139 in 47th Annual Meeting of
APRES, July 14-16, Charleston, SC (USA).
434. Hay FR, Lee J-S, Moreno CA, Garcia M, Abberton DG, Debouck, J. Hanson, A.
Muchugi, O. Oyatomi, L.G. Santos, H.D. Upadhyaya, L. Guarino. 2015. Inter-
and intra-species differences in seed longevity: What can be discovered from the
germination test data of the CGIAR genebanks? Abstract In: International
Society for Seed Science (ISSS) Seed Longevity Workshop, Wernigerode,
Germany, July 5 8, 2015
435. Engin Yol H.D. Upadhyaya and Blent Uzun. Validation of field resistance to
late leaf spot by using a molecular marker in groundnut. Abstract submitted in
EUCARPIA-Oil and Protein Crops Conference 1-5 November 2015.
436. Uzun, B., E. Yol and H.D. Upadhyaya. 2014. Marker-assisted screening for
resistance to biotic stresses in groundnut. P 93. In programme and abstracts
book, International Agriculture Congress 2014, Pullman Putrajaya Lekeside,
Putrajaya, Malaysia, 25-27 November 2014.
437. Mukri, G., H.L. Nadaf, R.S. Bhat, M.V.C. Gowda and H.D. Upadhyaya. 2014.
Screening of ICRISAT mini core collection of groundnut (Arachis hypogaea L.)
for high oleate trait: A step towards genetic improvement of nutritional quality of
oil. Abstracts and Short Communications 777 PS-III-24 in National Symposium
on Crop improvemnt for Inclusive Sustainable Development -at PAU on 7-9
November 14.
438. M.K. Pandey, H.D. Upadhyaya, P. Janila, A. Rathore, P. Khera, Y. Hong, X.
Liang, B.Guo and R.K. Varshney. 2014. Towards deploying genomic selection
for improving complex traits in peanut Authors and Professional Affiliation.
Presented In: AAGB 2014 - 7th International Conference on Advances in
Arachis through Genomics & Biotechnology, 11-14 November 2014, Savannah
Marriott Riverfront, 100 General McIntosh Boulevard, Savannah, GA 31401.
439. Gowda, C.L.L., S. Sharma and H.D. Upadhyaya. 2014. Conservation and
utilization of Plant Genetic Resources. 2014. Abstract presented in National
Symposium Indian Society of Genetics and Plant Breeding, Punjab Agricultural
University, Ludhiana , 7-9 November, 2014.
440. Nayak, S.N., H.K. Sudini, G. Agarwal, M.K. Pandey, H.D. Upadhyaya, P. Janila,
F. Hamidou, H. Desmae, P. Ozias-Akins, B. Guo and R.K. Varshney. 2014.
Combining genomic approaches to understand genetic control of aflatoxin
contamination in peanut. Presented In: AAGB 2014 - 7th International
Conference on Advances in Arachis through Genomics & Biotechnology, 11-14
November 2014, Savannah Marriott Riverfront, 100 General McIntosh
Boulevard, Savannah, GA 314.
441. Yol, E., H.D. Upadhyaya and Bulent Uzun. 2014. Molecular marker assisted
selection for resistance to sclerotinia blight in groundnut (Arachis hypogaea L.)
Abstracts In European biotechnology Congress 15-18 May 2014, Lecce, Italy.
442. Burow, M.D., J. Chagoya, M. Gomez, P. Payton, G. Burrow, J. Burke, K.
Kottapalli, N. Puppala, C. Chen, D. Rowland, L Bertioli, D. Bertioli, H.D
Upadhyaya and V. Vadez. 2014. Phenotyping for abiotic stress tolerance.
Abstract in APRES 46th Annual Meeting, July 8-10, 2014. San Antonio, TX.
443. Janila, P., M.K. Pandey, S.S. Manohar, H. K. Sudini, H.D. Upadhyaya, and
R.K. Varshney. 2014. Identification of introgression lines with superior pod yield
and improved rust resistance in peanut (Arachis hypogaea L.) P32-33. In:
IFLRC VI & ICLGG VII program and abstract book (joint conference of the 6th
International Food Legumes Research Conference and 7th International
Conference on Legume Genetics and Genomics) July 7 to 11, 2014 TCU
Place, 35 22nd Street East, Saskatoon, Saskatchewan, Canada.
444. Upadhyaya, H.D., S.L. Dwivedi, S. Sharma, R.K. Varshney and Sube Singh.
2014. Capturing Variations for Multiple Stress and Agronomic Traits for
Improvement of Grain Legumes. P42-43. In: IFLRC VI & ICLGG VII program
and abstract book (joint conference of the 6th International Food Legumes
Research Conference and 7th International Conference on Legume
Genetics and Genomics) July 7 to 11, 2014 TCU Place, 35 22nd Street
East, Saskatoon, Saskatchewan, Canada.
445. Upadhyaya, H.D., S.L. Dwivedi, Shivali Sharma and R.K. Varshney. 2014.
Chickpea germplasm for use in crop improvement: Approaches and way
forward. P 14 in Chickpea International Workshop on Harnessing Chickpea
Value Chain for Nutrition Security and Commercialization of Smallholder
Agriculture in Africa, Paramid hotel and resort, Debre Zeit, Ethiopia, January
30 to February 1, 2014.
446. Janila, P., R.K.Varshney, M.K. Pandey, H.D.Upadhyaya, P.Nagesh, T.V. Murali,
and S.N.Nigam. 2013. Marker assisted backcrossing (MABC) to improve oil
quality in peanut. Page: 18. Poster abstracts in GCP Annual Research Meeting,
27-30 September 2013, Lisbon, Portugal.
447. Sudini, H., H.D. Upadhyaya and C.L.L. Gowda. 2013. Peanut mini core
collection at ICRISAT: A reality in identifying multiple disease resistance sources.
Oral Technical Session: Host Resistance, 231-O in APS-MSA Joint Meeting, 10-
14 August 2013, Austin, Texas.
448. Varshney, R.K., R.K. Saxena, Vikas Singh, Vinay Kumar, Kishan Patel, Jimmy
Obala, P. Swathi, S.R. Koneka, K.B. Saxena, S.V Chanda, H.D. Upadhyaya,
Mamta Sharma, A. Rathore, G. Anuradha, P.S. Dharmaraj, K.N. Yamini, and S.
Muniswamy. 2013. Harnessing genome sequence information for pigeonpea
(Cajanus Cajan) improvement. Page: 19. Poster abstracts in GCP Annual
Research Meeting, 27-30 September 2013, Lisbon, Portugal.
449. Upadhyaya, H.D., S.L. Dwivedi, V. Vadez, L. Krishnamurthy, J. Kashiwagi, Sube
Singh, R.K. Varshney and K.N. Reddy. 2013. Using mini core collection to
identify new sources of variations for breeding and genomics of chickpea,
groundnut, and pigeonpea. Page: 21. Poster abstracts in GCP Annual Research
Meeting, 27-30 September 2013, Lisbon, Portugal.
450. Varshney, R.K., K. Pawan, H.D. Upadhyaya, M.K. Pandey, R. Manish, M.
Sriswathi, P. Janila, Yufang Guo, Michael R. McKain, Ervin D. Nagy, Steven J
Knapp, James Leebens-Mack, Joann A. Conner, Peggy Ozias-Akins. 2013.
Development and application of cost-effective genotyping assays for genetic
diversity analysis in the reference set of peanut (Arachis spp.). Page: 12. Poster
abstracts in GCP Annual Research Meeting, 27-30 September 2013, Lisbon,
Portugal.
451. Subbarao, G.V., K. Nakahara, Y. Ando, K.L. Sahrawat, S.P. Deshpande, P.
SrinivasaRao, H.D. Upadhyaya and C.T. Hash. 2013. Biological nitrification
inhibition (BNI) activity in sorghum Potential role for enhancing nitrogen-use
efficiency (NUE). In: Proceeding of Global Consultation on Millets Promotion for
Health & Nutritional Security, Hyderabad, India, December 18-20, 2013.
452. Sharma, S., H.D. Upadhyaya and C.L.L. Gowda. 2013. Establishing core
collections for enhanced use of germplasm in crop improvement. P 64 in
Asbtract Book of International Plant Breeding Congress 10-14 November, 2013
Antalya, Turkey.
453. Upadhyaya, H.D. 2013. Assessing novel gene for chickpea improvement. P
248 in Asbtract Book of International Plant Breeding Congress 10-14
November, 2013 Antalya, Turkey.
454. Upadhyaya, H.D., S.L. Dwivedi, S. Sharma, R.K. Varshney and Sube Singh.
2013. Trait-specific multiple stresses resistant sources to develop nutritionally
enhanced groundnut adapted to adverse agroecological conditions. Abstract in
ASA, CSSA & SSSA International Annual Meeting, 3-6 November, 2013, Tempa,
Florida.
455. Froenicke, L., C. Beitel, D. Scaglione, M. Pandey, H.D. Upadhyaya, M.C.
Moretzsohn, P. Guimaraes, S.C.M. Leal-Bertioli, R.K. Varshney, D. Bertioli and
R.W. Michelmore. 2013. Genome mapping by sequencing of the progenitors of
the cultivated peanut, Arachis duranensis and A. Ipaensis. Abstract in Sixth
International Conference of the Peanut Research Community on Advances in
Arachis through Genomics & Biotechnology, Zhengzhou, China June 17-21,
2013. Book of Abstract P 2.
456. Upadhyaya, H.D., S. Singh, S. Sharma, R.K. Varshney and C.L.L. Gowda. 2013.
Germplasm for groundnut improvement. Abstract in Sixth International
Conference of the Peanut Research Community on Advances in Arachis through
Genomics & Biotechnology, Zhengzhou, China June 17-21, 2013. Book of
Abstract P 14.
457. Sharma, S., N. Mallikarjuna, H.D. Upadhyaya and R.K .Varshney. 2013 Peanut
genetic enhancement through pre-breeding and genomics. Abstract in Sixth
458. Janila, P., R.K. Varshney, M.K. Pandey, H.D. Upadhyaya, V. Vadez, H.K.
Sudini, P. Nagesh and S.N. Nigam. 2013. Integrated molecular breeding for
enhanced resistance to diseases and quality parameters in peanut. Abstract in
Sixth International Conference of the Peanut Research Community on Advances
in Arachis through Genomics & Biotechnology, Zhengzhou, China June 17-21,
459. Pandey, M.K., H.D. Upadhyaya, A. Rathore, V. Vadez, M.S. Sheshashayee, M.
Sriswathi, M. Govil, M.V.C. Gowda, V.A. Kumar, P. Khera, R. S. Bhat, E. Monyo
and R.K. Varshney. 2013. Association mapping for resistance to abiotic and
biotic stresses and agronomically important traits in peanut (Arachis hypogaea
L.). Abstract in Sixth International Conference of the Peanut Research
Community on Advances in Arachis through Genomics & Biotechnology,
Zhengzhou, China June 17-21, 2013. Book of Abstract P 50.
460. Khera, P., M, Sriswathi, M. Roorkiwal, H.D. Upadhyaya, P. Janila, P. Ozias-
Akins and R.K. Varshney. 2013. Development and utility of cost-effective SNP
genotyping platform for genetics research and breeding applications in peanut.
Abstract in Sixth International Conference of the Peanut Research Community
on Advances in Arachis through Genomics & Biotechnology, Zhengzhou, China
June 17-21, 2013. Book of Abstract P 51.
461. Varshney, R.K., L. Froencike, M.K. Pandey, H.D. Upadhyaya, A. Rathore, B.
Liao, N. Barkley, B. Guo, M.V.C. Gowda, C. Holbrook, T.B. Brenneman, R.S.
Bhat, C. Chen, J. Damicone, M.D. Burrow, T. Isleib, L. Dean, M.L. Wang, V.
Vadez, S. Jackson and R.W. Michelmore. 2013. An international initiative for
genome-wide association studies (GWAS) in peanut (Arachis hypogaea L.).
Abstract in Sixth International Conference of the Peanut Research Community
on Advances in Arachis through Genomics & Biotechnology, Zhengzhou, China
June 17-21, 2013. Book of Abstract P 52.
462. Janila, P., M.K. Pandey, H.D. Upadhyaya, P. Nagesh , S.S. Manohar, M.
Sriswathi, K. Pawan, T. Radhakrishnan, N. Manivannan, R. Vasanthi, K.L.
Dobariya, S.K. Bera, J.B. Misra, S.N. Nigam and R.K. Varshney. 2013.
Introgression of FAD (Fatty Acid Desaturase) mutant alleles for enhanced oil
quality in groundnut using marker-assisted backcrossing. Abstract in Sixth
463. Kaashyap, M., A. Greenspan, R.V. Penmesta, E. von Wettberg, P.M. Gaur, A.
Rathore, H.D. Upadhyaya, R.R. Das, A.W. Khan, S. Singh, J. Kaur, M. Yasin,
D.R. Cook and R. K. Varshney. 2013. Analysis of 96 Rhizobial Sequences from
Chickpea Nodules by Whole Genome Sequencing. Abstract In: 3rd International
Symposium on Genomics of Plant Genetic Resources. P 170, April 16-19, 2013
Jeju, Korea.
464. Upadhyaya, H.D., S. Sharma, K.N. Reddy, S.K. Singh, S. Singh, R.K. Varshney
and C.L.L. Gowda. 2013. Utilization of Cultivated and Wild Germplasm in Crop
Improvement. Abstract In: 3rd International Symposium on Genomics of Plant
Genetic Resources. P 18, April 16-19, 2013 Jeju, Korea.
465. Upadhyaya, H.D., S. Sharma, K.N. Reddy, S.K. Singh, S. Singh, R.K.
Varshney and C.L.L. Gowda. 2013. Plant genetic resources and genomics for
crop improvement. National Conference on Climate Change in UAS-Bengaluru,
22-24 Feb 2013.
466. Gowda, C.L.L., K.N Rai, B.V.S. Reddy, K.B. Sasena, P.M. Gaur and H.D.
Upadhyaya. 2013. Crop Improvement Research at ICRISAT to meet Future
Climate Change Challenges. National Conference on Climate Change in UAS-
Bengaluru, 22-24 Feb 2013.
467. Thudi, M., H.D. Upadhyaya , A. Rathore, P.M. Gaur, L. Krishnamurthy, M.
Roorkiwal, S. Nayak, S.Chaturvedi, N.V.P.R. Gangarao, A. Fikre, P. Kimurto, P.
Sharma, S. Tobita, J. Kashiwagi, O. Ito and R.K. Varshney. 2013. Association
Mapping for Abiotic Stress Tolerance in Chickpea. Abstract In: XXI Plant and
Animal Genome Conference. San Diego, California, USA, January 12-16, 2013.
468. Khera, P., M. Sriswathi, M. Roorkiwal, M. Pandey, H.D. Upadhyaya, P. Janila,
P. Ozias-Akins, and R.K. Varshney. (2013). Cost-Effective KASPar Assays for
SNP Genotyping and Diversity Analysis in the Reference Set of Groundnut. Plant
and Animal Genome XXI Conference. Plant and Animal Genome. P0363.
469. Sharma, R., A.G. Girish, H.D. Upadhyaya, V.P. Rao, P. Humayun, T.K. Babu
and R.P. Thakur. 2012. Resistance to blast in Core Collection of Foxtail millet
Germplasm. Paper presented at the 10th Conference of the European
Foundation for Plant pathology, Wageningen, The Netherlands, Oct 1-5, 2012.
Abstract P52.
470. Upadhyaya, H.D., S. Sharma, K.N. Reddy, S. Singh, R.K. Varshney and C.L.L.
Gowda. 2012. Mini core collections as sources of diverse trait-specific
germplasm for use in legumes improvement programs. Abstract In: VI
International Conference on Legume Genetics and Genomics. Hyderabad, India
October 2-7, 2012.
471. Gowda, C.L.L., H.D. Upadhyaya, P.M. Gaur, and K.B. Saxena. 2012. Genetic
resources and genomics for enhancing the efficiency of crop improvement in
grain legumes. In: Proceedings of VI International Conference on Legumes
Genetics and Genomics, 2-7 October 2012, Hyderabad, India.
472. Sharma, S., H.D. Upadhyaya, K.N. Reddy, S. Singh and C.L.L. Gowda. 2012.
Pre-breeding for grain legume improvement. Abstract In: VI International
Conference on Legume Genetics and Genomics. Hyderabad, India October 2-7,
2012.
473. Upadhyaya, H.D., S.L. Dwivedi, S. Sharma, K.N. Reddy, S. Singh, N. Dronavalli,
and C.L.L. Gowda. 2012. Identification of diverse trait-specific germplasm for use
in crop improvement using mini core strategy. Proceedings ASA, CSSA and
SSSA Annual Meetings Cincinnati, OH; October 21 - 24, 2012.
474. Yi-Hong, W., H.D. Upadhyaya and K.H. Hasenstein. 2012. Association mapping
of soeghum biomass, grain, and saccharification yield traits using simple
sequence repeat markers. 2012. Plant and Animal Genome XX Conference,
Town and Country Hotel in San Diego, California, January 14-18, 2012. P0741.
475. Froenicke,L., C. Beitel, M.K. Pandey, H.D. Upadhyaya, M.C. Moretzsohn, P.M.
Guimaraes, S.C.M. Leal-Bertioli, R.K. Varshney, D.J. Bertioli and R. Michelmore.
2012. Applications of genome sequencing for peanut improvement. Plant and
Animal Genome XX Conference, Town and Country Hotel in San Diego,
California, January 14-18, 2012.
476. Roorkiwal M., H.D. Upadhyaya and P.C. Sharma. 2012. Analysis of SNP
diversity for abiotic stress responsive genes in chickpea. Abstract, in
International Conference on Plant Biotechnology for Food Security: New
Frontiers organized by the Society for Plant Biochemistry and Biotechnology 21-
24 February, 2012, National Agricultural Science Centre, New Delhi, India.
477. Raiz ul Roof Mir, A. Sharma, R.K. Saxena, R.V. Penmetsa, H.D. Upadhyaya, R.
Tuteja, K.B. Saxena, T. Shah, D. R. Cook and R.K. Varshney. 2012. Identification
of candidate genes associated with growth habit in pigeonpea (Cajanus cajan (L)
Millsp.) Plant and Animal Genome XX Conference, Town and Country Hotel in
San Diego, California, January 14-18, 2012.
478. Upadhyaya, H.D., C.L.L. Gowda and Sube Singh. 2011. Germplasm Resources
to Overcome Challenges of Global Climate Change.. Proceedings ASA, CSSA
and SSSA Annual Meetings Antonio, TX - Oct. 16-19, 2011.
479. Glaszmann, J.C., C. Billot, E. Arnuad, S.K. McGarth, K. Seetharam, S. Sharma,
X. Perrier and H.D. Upadhyaya. 2011. Core Reference Sets Of Sorghum And
Musa: From A Whole Collection To A Mini Core Collection And Back. Plant &
Animal Genomes XIX Conference, January 15-19, 2011, Town & Country
Convention Center San Diego, CA
480. Saxena, R.K., S. Songok, A. Dubey, R. V Penmesta, H.D. Upadhyaya, K.B.
Saxena, P. Kimurto, D. Cook, G. May and R.K. Varshney. 2011. Single-
nucleotide polymorphisms (SNPs) for diversity analysis and linkage mapping in
pigeonpea (Cajanus cajan L.). CGIAR Generation Challenge Programme, 2011
General Research Meeting 21-25 September 2011, Hyderabad India poster
abstracts 1.3, p-4. Texcoco, Mexico: Generation Challenge Programme.
481. Varshney, R.K., P. Gaur, M. Thudi, L. Krishnamurthy, G.V. Ranga Rao, H.C.
Sharma, R.K. Saxena, A.K. Jukanti, P. Kimurto, S. Songok, R. Mulwa, A. Firke,
S. Tripathi, Ch Bharadwaj, S. Datta, S.K. Chaturvedi, N. Nadrajan, M.S.
Sheshashayee, R.R. Mir, P. Hiremath, H. Kudapa, S. Bhatia, A. Rathore, T.
Shah, H.D. Upadhyaya, A. Kilian, A. Tyagi, M. Luo and D Cook. 2011.
Development and implementation of genomic and genetic for improving chickpea
productivity for marginal environments in Sub-Saharan Africa and Asia. CGIAR
Generation Challenge Programme, 2011 General Research Meeting 21-25
September 2011, Hyderabad India poster abstracts 2.9, p-16. Texcoco, Mexico:
Generation Challenge Programme.
482. Pandey, M., R.K. Varshney, B. Gautami, V. Sujay, M.C.V. Gowda, T.
Radhakrishnan, V. Vadez, S.N. Nigam, T. Shah, H.D. Upadhyaya, S. Isobe, G.
He, D. Bertioli, S. Knapp, and D cook. 2011. Consensus genetic maps for drought
tolerance related groundnut traits and foliar diseases resistance traits in
cultivated groundnut (Arachis hypogaea L.). CGIAR Generation Challenge
Programme, 2011 General Research Meeting 21-25 September 2011,
Hyderabad India poster abstracts 2.12, p-20. Texcoco, Mexico: Generation
Challenge Programme.
483. Upadhyaya, H.D., V. Vadez, S. Sharma, C.T. Hash, L. Krishnamurthy, S.
Kaliyamoorthy, W.W. Rattunde, S.L. Dwivedi, M.A. Mgonja, P.M. Salimath, C.K.
Karari, L.N.D. mapunda, S.B. Caulibaly and N. Cisse. 2011. Variability for post-
flowering drought tolerance in sorghum reference set. CGIAR Generation
Challenge Programme, 2011 General Research Meeting 21-25 September 2011,
Hyderabad India poster abstracts 2.24, p-32. Texcoco, Mexico: Generation
Challenge Programme.
484. Reyazul Rouf Mir, A. Sharma, R. Saxena, H.D. Upadhyaya, R. Tuteja, K.B.
Saxena, T. Shah, R.V. Penmesta, D.R. Cook and R.K. Varshney. 2011.
Assiciation analysis for determinacy trait in pigeonpea. P-43 abstract in
Genomics and Biodiversity 15th ADNAT Convention, 23-25 February, 2011,
CCMB, Hyderabad, India.
485. Pandey, M., S.N. Nigam, M.C.V. Gowda, Y. Khedikar, M. Sriswathi. M. Govil, V.
Sujay, B. Gautami, H.D. Upadhyaya and R.K. Varshney. 2011. Molecular
mapping and marker-Assisted introgression of rust resistance in cultivated
groundnut (Arachis hypogaea L.). P-52 abstract in Genomics and Biodiversity
15th ADNAT Convention, 23-25 February, 2011, CCMB, Hyderabad, India.
486. Penmetsa, R.V., D.H. Kim, E. von Wettberg, M. Kassa, N. Carrasquilla-garcia,
P.M. Gaur, M. Kaashyap, H.D. Upadhyaya, S. Singh, Y. Mahammad, R.K.
Varshney and D.R. Cook. 2011. Towards understanding the impact of
domestication on nitrogen fixation in legumes using chickpea as model system.
P-54 abstract in Genomics and Biodiversity 15th ADNAT Convention, 23-25
February, 2011, CCMB, Hyderabad, India.
487. Upadhyaya, H.D. and C.L.L. Gowda. 2011. Genetic resources to overcome the
adverse effects of climate change. I-23 abstract in Genomics and Biodiversity
15th ADNAT Convention, 23-25 February, 2011, CCMB, Hyderabad, India.
488. Naha, G., A. Kumar, P. Dauthai, A. Dubey, P. Hiremath, A.B. Prakesh, A. Farmer,
M. Bhide, T. Shah, P. Gaur, H.D. Upadhyaya, S. Bhatia, D. Cook, G. May and
R.K. Varshney. 2011. Novel genetic molecular markers (GMMS) and transcript
map for chickpea (Cicer arietinum L.). P-27 abstract in Genomics and
Biodiversity 15th ADNAT Convention, 23-25 February, 2011, CCMB, Hyderabad,
India.
489. Gautami, B., M. Pandey, K. Ravi, M.C.V. Gowda, T. Radhakrishnan, V. Vedez,
S.N. Nigam, H.D. Upadhyaya, S. Isobe, G. He, D. Bertioli, S. Knapp, D. Cook,
L. Narasu, D. Hoisington and R.K. Varshney. 2011. A dense consensus genetic
map based on three mapping populations segregating for drought tolerance traits
in cultivated groundnut (Arachis hypogaea L.). P-25 abstract in Genomics and
Biodiversity 15th ADNAT Convention, 23-25 February, 2011, CCMB, Hyderabad,
India.
490. Varshney, R.K., H.D. Upadhayaya, L. Krishnamurthy , P. Gaur , H.C. Sharma,
P. Kimurto, M.Thudi and Asnak. 2011. Harnessing the Potential of Germplasm
Collections through Genomic Tools for Crop Improvement in Chickpea. Plant &
Animal Genomes XIX Conference, Town & Country Convention Center San
Diego, CA.
491. Varshney, R.K., C. Gowda, T, Radhakrishnan, G. Bhimana, M. Pandey, V.
Sujay, R.Koppolu, V. Vadez, S.N. Nigam, H.D. Upadhyaya, Y. Khedikar, S.
Isobe, G.He, D. Bertioli, S. Knapp, D. Cook.2011. Towards Integrating
Genomics in Breeding in Groundnut (Arachis hypogaea L.). Plant & Animal
Genomes XIX Conference, January 15-19, 2011 Town & Country Convention
Center San Diego, CA.
492. Mir, R., A. Sharma, R. Saxena, H.D. Upadhyaya, R. Tuteja, K.B. Saxena, T.
Shah, R. V. Penmetsa, D. Cook and R.K. Varshney. 2011. Association Analysis
for Determinacy Trait in Pigeonpea (Cajanus cajan (L) Millsp.). Plant & Animal
Genomes XIX Conference, January 15-19, 2011 Town & Country Convention
Center San Diego, CA.
493. A.Bohra, A., A. Dubey, R.Saxena, R V.Penmetsa, B. Gnanesh, N.Kumar,
A.Farmer, G.Srivani, H.D. Upadhyaya, R. Gothalwal, M. B. Gowda, D. Singh,
K.B. Saxena, P K. Kishor, N. Singh, C.Town, G. May, D. Cook, R.K. Varshney.
2011. Development and Application of Large-Scale SSR and SNP Markers for
Genome Mapping and Marker-Trait Association Studies in Pigeonpea. Plant &
Animal Genomes XIX Conference, January 15-19, 2011 Town & Country
Convention Center San Diego, CA.
494. Upadhyaya, H.D., S. Sharma, N. Mallikarjuna and S. Singh. 2011. Utilization of
wild Arachis species for peanut improvement.Abstract in American Peanut
Research and Education Society, Inc. annual meeting San Antonio, Texas, July,
12-14, 2011. Vol 43:91-92.
495. Girish, A.G., T.K. Babu, R.P. Thakur, V.P. Rao, R.Sharma and H.D. Upadhyaya.
2010. Development of screening techniques and identification of resistance to
blast disease in foxtail millet. Abstract presented in 63rd Annual Meeting INDIAN
PHYTOPATHOLOGICAL SOCIETY National Symposium on Perspective in the
Plant Health Management December 14-16, 2010. Division of Plant Pathology
Indian Agricultural Research Institute, New Delhi 110 012.
496. Upadhyaya, H.D., D. Yadav and C.L.L. Gowda. 2010. Protecting Crops against
Diseases and Pests Using Resistance from New Sources of Germplasm.
Proceedings ASA, CSSA and SSSA Annual Meetings (Oct. 31 - Nov. 3, 2010):
Long Beach, CA USA.
497. Divakara, B.N. and H.D. Upadhyaya. 2010. Identification and divergence studies
of genotypes with superior pod traits in Tamarindus indica L.: An Agroforestry
tree. In International Symposium on Indigenous Fruit Trees for Dryland Africa:
Domestication for Use in a Changing Environment, Benin, October 2010. P 24.
498. Gowda. C.L.L., H. D. Upadhyaya and Shivali Sharma. 2010. Conservation and
use of agrobiodiversity in SAT region. Abstract in International Symposium on
Sustainable Agricultural Development and use of Agrobiodiversity in the Asia-
Pacific Region, 13-15 Oct 2010, Suwon, Republic of Korea. P. 17.
499. David, E. Williams, D. G. Debouck H.D. Upadhyaya and D. Dumet. 2010.
Conservation and use of grain legumes at the global scale:The role of the
international Centres of the CGIAR. In 5th International Legumes Conference,
Buenos Aires, Argentina, 18-24 August
2010. http://www.leguminosae.com.ar/index_en.html
500. Upadhaya, H.D., D. Yadav, N. Dronavalli, C.L.L. Gowda and S. Singh. 2010.
Mini core germplasm collections for infusing genetic diversity in plant breeding
programs. Leads paper presented in: Third National Congress on "Plant
Breeding and Genomics, July 7-9, 2010, TNAU, Coimbatore, India. P 9.
https://sites.google.com/site/ispbtnau/publications
501. Divakara, B.N., H.D. Upadhyaya and R. Krishnamurthy. 2010. Identification and
evaluation of diverse genotypes in Pongamia pinnata (L.) for genetic
improvement in seed traits. Page 59. Abstract in Sustainable Utilization and
Conservation of Forests in the Genomics Era, IUFRO Kuala Lumpur 2010, 7-12
March, Kuala Lumpur, Malaysia.
502. Upadhyaya, H.D., S.L. Dwivedi, M. Ambrose, N. Ellis, J. Berger, P. Smykal, D.
Debouck, G. Duck, D. Demet, A. Flavel, S.K. Sharma, N. Mallikarjuna and C.L.L.
Gowda. 2010. Management of Legume genetic Resources to Enhance Food and
Nutritional Security. Page 35. Abstract in Legumes for Global Health; Legume
Crops and Products for Food, Feed and Environmental Benefits5th International
Food Legumes Research Conference (IFLRC V) & 7th European Conference on
Grain Legumes (AEP VII), April 26-30, 2010, Antalya, Turkey.
503. Mallikarjuna, N., Deepak Jadhav, H.C. Sharma, S. Senthilvel, Livinder Kaur, M.
Byregowda, R.K Varshney, H.D. Upadhyaya, H.D., R.K. Srivastava and K.B.
Saxena. 2010. Cajanus platycarpus as the Donor of Useful Traits for Pigeonpea
(Cajanus cajan L.) Improvement. Page 200. Abstract in Legumes for Global
Health; Legume Crops and Products for Food, Feed and Environmental
Benefits5th International Food Legumes Research Conference (IFLRC V) & 7th
European Conference on Grain Legumes (AEP VII), April 26-30, 2010, Antalya,
Turkey.
504. Sandhu, J.S., Inderjeet Singh, Jagmeet Kaur, R. Bhardwaj, B.S. Gill, H. Kaur,
S.K Gupta, P.M. Gaur, H.D. Upadhyaya, J. Berger, T.N. Khan, H. Nayar and
K.H.M. Siddique. 2010. Genetic enhancement for Short Duration and Cold
Tolerance in Chickpea. Page 214. Abstract in Legumes for Global Health:
Legume Crops and Products for Food, Feed and Environmental Benefits5th
International Food Legumes Research Conference (IFLRC V) & 7th European
Conference on Grain Legumes (AEP VII), April 26-30, 2010, Antalya, Turkey
505. Jorge, M.A., G. Claessens, J. Hanson, M. E. Dulloo, E. Goldberg, I. Thormann,
S. Alemayehu, E. Gacheru, A. Amri, E. Benson, D. Dumet, N. Roux, P. Rudebjer,
R. S. Hamilton, I. Sanchez, S. Sharma, S. Taba, H.D. Upadhyaya and I.V.D.
HOUWE. 2010. Knowledge sharing on best practices for managing crop
genebanks. Proceedings of Scientific and Technical Information and Rural
Development IAALD XIIIth World Congress, Montpellier, 26-29 April 2010. P 1-8
506. Gowda C.L.L., W.D. Dar, H.D. Upadhyaya and D. Yadav. 2010. Biodiversity and
achieving the UNMDG of having hunger and poverty by 2015. P. 24-27. In
International Conference on Biodiversity in relation to food & human security in
a warming planet. MSSRF Chennai, India, February 15-17, 2010.
507. Gowda C.L.L., R.P.S. Pundir, H.D. Upadhyaya, M. Seymour, M. Ali, M.M.
Rahman, X. Zong, S. Khalil, A.M. Haqqani, S.H. Sabaghpour, Aung May Than
and J.K. Mligo. 2009. Impact of research and development in food legumes on
production and productivity in the last two decades. In M. C. Kharkwal (ed.),
Food Legumes for Nutritional Security and Sustainable Agriculture, Vol. 1: 54
71. 2008 Indian Society of Genetics and Plant Breeding. Printed in India.
Proceedings of the Fourth International Food Legumes Research Conference
(IFLRC-IV), October 1822, 2005, New Delhi, India M. C. Kharkwal (ed.)
Copyright 2008, ISGPB, New Delhi, India
508. Gowda, C.L.L., K.B. Saxena, R.K Srivastava, H.D. Upadhyaya and S.N. Silim.
2009. Pigeonpea-From an Orphan to leader in food legumes. Page 22 in Harlan
II- An International Symposium. Biodiversity in Agriculture: Domestication,
Evolution, & Sustainability, 14-18 Sep 2008, University of California, Davis, USA.
509. Kassa, M.T., P.R. Varma, A.D. Farmer, N. Carrasquilla-Garcia, S. Datta, H.D.
Upadhyaya, E. von Wettberg, G.E. Bruening, R.K. Varshney and D. R. Cook.
2009. Single Nucleotide Polymorphism (SNP) genotyping in diverse genotypes
of cultivated pigeonpea and wild relatives with the Illumina GoldenGate assay.
Paper presented in Annual Plant and Animal Genetics Meeting. 200. USA.
510. Dwivedi, S.L., H.D. Upadhyaya and C.L.L. Gowda. 2009. Approaches to
enhance the value of genetic resources in crop improvement. Pages 68-74. in
Strengthening information on Plant Genetic Resources in Asia. Paper presented
in the meeting held at the FAO, Bangkok, Thailand.
511. Waliyar, F., H.D. Upadhyaya, B.R. Ntare, A. Diallo and M. Diallo. 2009.
Phenotyping groundnut mini-core collection for resistance to Aspergillus Flavus
and Aflatoxin contamination, Sadore, Niger. Paper presented in the 4th
Arachis through Genomics and Biotechnology, Oct 19-22, Bamako, Mali.
512. Kottapalli P., H.D. Upadhyaya, P. Payton, S.L. Dwivedi, D.O. Kalule and N.
Puppala. 2009. Genetic diversity in Global Valencia peanuts (Arachis hypogaea
L. ssp.fastigiata var.fastigiata) using SSR markers. Paper presented in the 4th
Arachis through Genomics and Biotechnology, Oct 19-22, Bamako, Mali.
513. Khedikar, Y.P., M.V.C. Gowda, K.V. Patgar, H.D. Upadhyaya and R.K. Varshney.
2009. A QTL study on leaf spot and rust revealed a major QTL and candidate
marker for rust resistance to deploy in molecular breeding of groundnut (Arachis
hypogaea L.). Page 25. Abstract Annual Research Meeting of the Generation
challenge Program, 20-23 Sep 2009 Bamako Mali.
514. Krishnamurthy, L., J. Kashiwagi, R.K. Varshney, H.D. Upadhyaya, S. Tobita, O.
Ito and M.S. Sheshasayee, 2009. Linking genetic diversity with phenotype for
drought tolerance traits through molecular and physiological characterization of a
diverse reference collection of chickpea. Page 44. Abstract Annual Research
Meeting of the Generation challenge Program, 20-23 Sep 2009 Bamako Mali.
515. Upadhyaya, H.D., Shivali Sharma and C.L.L. Gowda. 2009. Mini core collection:
An International Public Good to enhance use of germplasm in crop improvement.
Pages 1-11 in Souvenir and Abstracts of National Symposium on Recent Global
Developments in the management of Plant Genetic Resources (Tyagi et al, eds.)
held at NBPGR, Pusa Campus, New Delhi, 17-18 December 2009.
516. Upadhyaya, H.D., S.L. Dwivedi, S. Gopalakrishnan and C.L.L. Gowda. 2009.
Exploiting agrobiodiversity to meet new challenges to agricultural production in
21st century. Abstract presented in ASA-CSSA-SSSA 2009 International Annual
Meetings, November 1-5, Pittsburgh, Pennsylvania
517. Divakara, B.N. and H.D. Upadhyaya. 2009. Identification of diverse genotypes
with high oil content in Madhuca latofolia L. for further use in crop improvement.
Pages 31-32 in Abstract- 2009 IUFRO Tree Biotechnology Conference, June 28-
July 2, 2009, Whislter, BC, Canada.
518. Upadhyaya, H.D., S.L. Dwivedi, R.K. Varshney, C.L.L. Gowda, R.
Bhattacharjee, D.A. Hoisington and V. Vadez. 2009. Enhancing value of legume
genetic resources using core/mini core and applied genomics. p 65 in the
Souvenir and Abstracts, International conference on current tends in
Biotechnology and implications in Agriculture, Feb 19-21 2009, Meerut, UP,
India.
519. Subbarao G.V., A.K.M.Z. Hossain , K. Nakahara, T. Ishikawa, M. Yanbuaban, T.
Yoshihashi, H. Ono, M. Yoshida, C.T. Hash, H.D. Upadhyaya, P. Srinivasarao,
B.V.S. Reddy, K.L. Sahrawat and O. Ito. 2009 Biological Nitrification Inhibition
(BNI) Potential in Sorghum. Pages 1-9 in The Proceedings of the International
Plant Nutrition Colloquium XVI. UC Davis, USA.
520. Kottapalli, P., H.D. Upadhyaya, R.K. Varshney, K.R. Kottapalli, P. Payrton and
N. Puppala. 2009. Molecular characterization and assessment of genetic
diversity in Valencia mini core using SSR markers. Abstract in APRES Meeting
2009 at North Carolina State University, USA.
521. Upadhyaya, H.D., C.L.L. Gowda, S.L. Dwivedi, V. Vadez, L. Krishnamurthy, J.
Kashiwagi, S. Pande, H.C. Sharma, M.S. Sheshashaye, L. Boshu, L. Giang and
R. Kumar. 2009. Core and mini core collections: strategies for enhancing use of
germplasm. p 74 in the Souvenir and Abstracts, International conference on
current tends in Biotechnology and implications in Agriculture, Feb 19-21 2009,
Meerut, UP, India.
522. Upadhyaya, H.D., S.L. Dwivedi, R.K. Varshney, C.L.L. Gowda, R.
Bhattacharjee, D.A. Hoisington and V. Vadez. 2009. Enhancing value of legume
genetic resources using core/mini core and applied genomics. pp 18-24 in the
proceedings, International conference on current tends in Biotechnology and
implications in Agriculture, Feb 19-21 2009, Meerut, UP, India.
523. Upadhyaya, H.D. and C.L.L. Gowda. 2009. Use of core collection approach to
enhance germplasm utilization in chickpea and pigeonpea. In M. C. Kharkwal
(ed.), Food Legumes for Nutritional Security and Sustainable Agriculture, Vol. 2:
591598. 2008 Indian Society of Genetics and Plant Breeding. Printed in India.
Proceedings of the Fourth International Food Legumes Research Conference
(IFLRC-IV), October 1822, 2005, New Delhi, India M. C. Kharkwal (ed.)
Copyright 2008, ISGPB, New Delhi, India
524. Upadhyaya, H.D., C.L.L. Gowda, S.L. Dwivedi, V. Vadez, L. Krishnamurthy, J.
Kashiwagi, S. Pande, H.C. Sharma, M.S. Sheshashaye, L. Boshu, L. Giang and
R. Kumar. 2009. Core and mini core collections: strategies for enhancing use of
germplasm. p 13 in Abstracts, International Conference on Grain legumes:
quality improvement, value addition and trade. 14-16 October 2009, Indian
Institute of Pulses Research, Kanpur, India.
525. Upadhyaya, H.D., C.L.L. Gowda and D.V.S.S.R. Sastry. 2008. Management of
germplasm collections and enhancing their use by mini core and molecular
approaches. pp 35-70 in Capacity Building for Development and Implementation
of Risk Management Systems on Genetic Resources (eds: Sheng-Chung Huang
and Shu Chen). Proceedings of the APEC-ATCWG International Workshop, 14-
17 October 2008, Taiwan Agricultural Research institute, Taichung, Taiwan.
526. Upadhyaya, H.D., S.L. Dwivedi, R.K. Varshney, D.A. Hoisington and C.L.L.
Gowda. 2008. Using genetic and genomic resources to broaden the genetic base
of cultivated groundnut. Page 6, Abstract Book. AAGB 2008., 3rd International
Genomics and biotechnology, 4-8 November 2008, ICRISAT, Hyderabad andhra
Pradesh, India.
527. Vander Maesen L.J.G, R.P.S. Pundir and H.D. Upadhyaya. 2009. Use made of
wild relatives in breeding. In M. C. Kharkwal (ed.), Food Legumes for Nutritional
Security and Sustainable Agriculture, Vol. 2: 741749. 2008 Indian Society of
Genetics and Plant Breeding. Printed in India. Proceedings of the Fourth
International Food Legumes Research Conference (IFLRC-IV), October 1822,
2005, New Delhi, India M. C. Kharkwal (ed.) Copyright 2008, ISGPB, New
Delhi, India.
528. Kashiwagi J., L.K. Krishnamurthy, H.D. Upadhyaya, S. Chandra and P.M. Gaur.
2009. Genetic control of drought avoidance root traits in chickpea (Cicer
arietinum L.). In M. C. Kharkwal (ed.), Food Legumes for Nutritional Security and
Sustainable Agriculture, Vol. 2: 584588. 2008 Indian Society of Genetics and
Plant Breeding. Printed in India. Proceedings of the Fourth International Food
Legumes Research Conference (IFLRC-IV), October 1822, 2005, New Delhi,
India M. C. Kharkwal (ed.) Copyright 2008, ISGPB, New Delhi, India.
529. Upadhyaya H.D., S.L. Dwivedi, V. Vadez, L. Krishnamurthy, B. Clerget, E.W.
Ratuunde, M.A. Mgonja, P.M. Salimath, W. Ntundu, M. Diourte and N. Cisse.
2009. Phenotyping sorghum reference set for post-flowering drought tolerance.
Page 11. Abstract Annual Research Meeting of the Generation challenge
Program, 20-23 Sep 2009 Bamako Mali.
530. Puppala, N, H.D. Upadhyaya, S.L. Dwivedi, K.R. Kottapalli, P. Payton and M.
Burow. 2008. Genetic enhancement of Valencia core collection and molecular
characterization of U.S. peanut mini core collection using SSR markers. Page 7,
Abstract Book. AAGB 2008., 3rd International Conference of the Peanut
Research Community on Avances in Arachis through Genomics and
biotechnology, 4-8 November 2008, ICRISAT, Hyderabad Andhra Pradesh,
India.
531. Gowda, M.V.C., Y.P. Khedikar, V.P. Kusuma, V. Sujay, S. Bhat, H.D.
Upadhyaya and R.K. Varshney. 2008. Genetic enhancement of resistance to
foliar diseases- strategies and prospects. Page 22, Abstract Book. AAGB 2008.,
3rd International Conference of the Peanut Research Community on Advances
in Arachis through Genomics and biotechnology, 4-8 November 2008, ICRISAT,
Hyderabad Andhra Pradesh, India.
532. Vadez, V., K.L. Krishnamurthy, P. Ratnakumar, S. Rao, J.M. Devi, N. Srivastava,
K.K. Sharma, P. Bhatnagar-Mathur, R.K. Varshney, H.D. Upadhyaya, R. Aruna
and S.N. Nigam. 2008. Phenotypic assessment of groundnut response to key
abiotic stress. Page 24, Abstract Book. AAGB 2008., 3rd International
Genomics and biotechnology, 4-8 November 2008, ICRISAT, Hyderabad Andhra
Pradesh, India.
533. Sujay, V., V.P. Kusuma, G. Yugandhar, S. Bhat, M.V.C. Gowda and H.D.
Upadhyaya 2008. Selection of accessions from minicore to improve diseases
resistance in groundnut. Page 48, Abstract Book. AAGB 2008., 3rd International
Genomics and biotechnology, 4-8 November 2008, ICRISAT, Hyderabad Andhra
Pradesh, India.
534. Ajaya, B.C., G. Yugandhar, V.P. Kusuma, M.V.C. Gowda, H.L. Nadaf and H.D.
Upadhyaya 2008. Evaluation of mini core set of germplasm for use in breeding
Confectionery groundnut (Arachis hypogaea L.). Page 42, Abstract Book. AAGB
2008., 3rd International Conference of the Peanut Research Community on
Advances in Arachis through Genomics and biotechnology, 4-8 November 2008,
ICRISAT, Hyderabad Andhra Pradesh, India.
535. Khedikar, Y.P., K.V. Patgar, M.V.C. Gowda, H.D. Upadhyaya and R.K.
Varshney. 2008. Construction of a genetic linkage map and QTL analysis for late
leaf spot and rust in groundnut (Arachis hypogaea L.). Page 93, Abstract Book.
AAGB 2008., 3rd International Conference of the Peanut Research Community
on Advances in Arachis through Genomics and biotechnology, 4-8 November
2008, ICRISAT, Hyderabad Andhra Pradesh, India.
536. Upadhyaya, H.D., S.L Dwivedi, Michael Baum, R.K. Varshney, S.M. Udupa,
C.L.L. Gowda, V. Prasanth, B.J. Furman, D.A. Hoisington, S. Chandra and Sube
Singh. 2008. Allelic Richness and Diversity in Global Composite Collection and
Reference Sets in Chickpea (Cicer Arietinum L.). Page 45-46, Abstract. ICSC
2008, 5th International Crop Science Congress & Exhibition, 13-18 April 2008,
Jeju, Korea.
537. Upadhyaya, H.D., S.L. Dwivedi, D.A. Hoisington, P.M. Gaur, C.L.L. Gowda, R.K.
Varshney, S. Chandra, S.M. Udupa, B.J. Furman and M. Baum. 2008.
Completing genotyping of composite germplasm set of chickpea. Pages 47-49.
Project Abstracts, GCP Annual Research Meeting, 16-20 September 2008,
Bangkok, Thailand.

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