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Update in Tuberculosis and Nontuberculous

Mycobacterial Disease 2011


Payam Nahid1 and Dick Menzies2
1
Division of Pulmonary and Critical Care Medicine and Curry International Tuberculosis Center, University of California, San Francisco
at San Francisco General Hospital, San Francisco, California; and 2Respiratory Epidemiology Unit, Montreal Chest Institute, McGill University,
Montreal, Quebec, Canada

The number of tuberculosis (TB) cases and global TB incidence TB among immigration applicants to high-income countries
rates is decreasing according to the latest World Health Organi- (who routinely undergo radiographic screening) with estimates
zation Global Tuberculosis Report (1). This is very welcome news. from large–scale, community-based prevalence surveys. Al-
However, the 8.8 million incident cases of TB, 1.1 million deaths though the absolute estimates among immigration applicants
from TB among HIV-negative people, the 350,000 deaths from HIV- may be different from a properly conducted community-based
associated TB, and the millions of children orphaned as a result of survey, the applicant data are already gathered routinely by the
parental deaths caused by TB provide a stark reminder of the mag- United States, Canada, and several other countries and may
nitude of devastation caused by TB each year. Advances in under-
provide insights into the epidemiology of TB and the impact
standing TB epidemiology diagnosis and treatment in 2011, many
of TB control measures in many high-burden countries.
of which were reported in the Journal, provide hope that the annual
Another population-based approach to investigating TB is
decline in TB cases will accelerate.
demonstrated in a study by Brassard and colleagues, who used
health administrative databases from Quebec, Canada to inves-
tigate the association between prescription of inhaled corticoste-
EPIDEMIOLOGY OF TUBERCULOSIS AND LATENT
roids and incidence of active TB (4). More than 99% of
TUBERCULOSIS INFECTION
Canadian residents are included in these health administrative
In many low- and middle-income countries, case notification in- databases, reducing potential selection bias. Almost 500,000
creased dramatically with the introduction of directly observed individuals had received at least three prescriptions of any pul-
treatment, short-course (DOTS), reflecting better access to ac- monary medication over 16 years; of these, 465 had active TB
curate diagnosis with high-quality smear microscopy and better (defined as at least two first-line TB drugs dispensed for at least
reporting (2). However, there is uncertainty regarding how 6 mo). Among individuals who did not receive oral corticoste-
many cases remain undiagnosed. Van’t Hoog and colleagues roids, those who had received high-dose inhaled corticosteroids
report on a massive community-based survey in Western Kenya (,1,000 mg/d of fluticasone or equivalent) had double the risk
in which 20,710 participants completed questionnaires and un- of nonusers (adjusted relative risk, 1.97; 95% confidence inter-
derwent chest X-rays and sputum examinations to determine val, 1.2–3.3).
the prevalence of pulmonary tuberculosis (TB) (3). In total, There are limitations to this study that are common to all such
123 persons were detected to have smear and/or culture- studies using health administrative databases. The most impor-
positive pulmonary TB. Of these, only six were currently on tant is that those who did not develop TB may not have had la-
TB therapy, although another 74 were on treatment but were tent TB infection (LTBI) because country of birth and other
microbiologically negative. Of the 123 cases, 51% were HIV markers of risk of TB infection were unknown. Because the ma-
infected; only 25% of these had been previously diagnosed. jority of those who received inhaled corticosteroids were un-
If all those with chronic cough had been investigated, 70 likely to have had LTBI, they could not have developed
(60%) of the 117 cases would have been detected. In total, active TB, resulting in an underestimate of the potential impact
3,500 individuals reported chronic cough, meaning that only of inhaled corticosteroids. Nonetheless, this study adds to the ev-
2% of those with chronic cough had prevalent active TB and only idence that significant immune suppression can occur with use of
1% were smear positive. Combining chest X-ray and symptoms inhaled corticosteroids. The unequivocal benefits of inhaled cor-
could have identified all prevalent TB but would require screen- ticosteroids in patients with severe asthma must be weighed
ing 7,342 individuals, of whom only 0.6% were smear positive against the mounting evidence of increased risk of serious infec-
and only 1.6% were culture positive. Hence, any strategy to en- tious diseases.
hance case detection will involve screening large numbers of Anandaiah provided an update of the epidemiology, pathogen-
individuals. Further operational research is required to assess esis, diagnosis, and treatment of HIV-TB (5). HIV accounts for
the costs, feasibility, and benefits of such large-scale screening 15% of global cases and 28% of TB-related deaths; these esti-
programs. mates are approximately double those of 2006, reflecting better
Well executed prevalence surveys provide substantial infor- awareness and testing for HIV coinfection. Highly active antire-
mation, particularly when repeated to indicate temporal trends, troviral therapy has dramatically improved survival; however,
but are very expensive. It would be of interest to compare the because the risk of reactivation to active TB remains substantially
prevalence of active smear- and/or culture-positive pulmonary higher among HIV-coinfected individuals on highly active anti-
retroviral therapy than among HIV-uninfected individuals, it is
plausible that the total number of TB cases among HIV-infected
(Received in original form March 18, 2012; accepted in final form April 30, 2012) individuals may continue to increase. Smear microscopy is less
Correspondence and requests for reprints should be addressed to Payam Nahid, sensitive in HIV coinfected individuals but is enhanced with light-
M.D., M.P.H., University of California, San Francisco at San Francisco General emitting diode (LED) fluorescence microscopy, improved meth-
Hospital, San Francisco, CA 94110. E-mail: pnahid@ucsf.edu ods of sputum concentration, and sputum sample collection in
Am J Respir Crit Care Med Vol 185, Iss. 12, pp 1266–1270, Jun 15, 2012 1 day (6). Hence, smear microscopy remains the primary method
Copyright ª 2012 by the American Thoracic Society
DOI: 10.1164/rccm.201203-0494UP of active TB diagnosis for resource-limited settings where the
Internet address: www.atsjournals.org feasibility of liquid cultures and nucleic acid application tests
Pulmonary, Sleep, and Critical Care Updates 1267

(e.g., GeneXpert) is uncertain given their high costs. No trials Davis and colleagues implemented an electronic, real-time per-
have demonstrated conclusively that treatment of active TB for formance monitoring system at primary health care facilities in
less than 6 months is adequate for HIV-infected persons. In fact, five districts of Uganda to describe adherence to international
some concern has been raised by recent systematic reviews (7) guidelines for TB suspect evaluation and TB case detection
and trials (8) that therapy should be routinely prolonged to (12). During the first quarter of 2009, clinicians ordered sputum
9 months to reduce rates of relapse, which are otherwise unac- smear microscopy for only 21% of patients with cough for
ceptably high in HIV-coinfected individuals. 2 weeks or more, and only 71% of patients with a positive
Cost effectiveness analyses are useful to assess alternative AFB sputum examination received TB treatment. These pro-
strategies when one strategy may be more effective but the al- portions increased to 53 and 84%, respectively, in the fourth
ternative is less costly. IFN-g release assays (IGRAs) are new quarter of 2009. The number of TB cases identified and pre-
tests for the diagnosis of LTBI for which there is consistent scribed treatment increased from 5 to 21. These data suggest
evidence of high specificity in all settings and populations. that monitoring and evaluation can strengthen health systems in
There is also reasonably consistent evidence that IGRAs are low-income countries and can facilitate operational research on
more costly. Linas and colleagues compared screening for LTBI the effectiveness and sustainability of interventions to improve
with tuberculin skin testing (TST) or IGRAs versus no screen- TB case detection.
ing in 19 different populations within the United States (9). Standard AFB smear microscopy involves collection of spu-
They found that screening of close contacts, HIV-infected indi- tum specimens on at least 2 days and examination of smears
viduals, and recent immigrants was very cost effective (using using light microscopy. This approach is time consuming and
a definition of cost less than $50,000 per quality-adjusted life costly to patients who must make three visits to a health care
year [QALY] gained). IGRAs were more cost effective than facility. As a result, up to 50% of patients fail to return to pro-
TST in all foreign-born populations, likely reflecting the impact vide a second specimen or receive results. Cattamanchi and col-
of BCG vaccination on TST specificity. TST was more cost leagues (6) compared the diagnostic accuracy of four case
effective than IGRAs in contacts, HIV-infected individuals, detection strategies, specifically comparing one specimen ver-
patients taking immune-suppressive medications, populations sus two and traditional light microscopy versus LED fluores-
with chronic medical conditions, and vulnerable groups such cence microscopy in 464 patients with cough for at least
as the homeless, former prisoners, or injection drug users. How- 2 weeks admitted to Mulago Hospital in Kampala, Uganda.
ever, for the vulnerable groups (except for the homeless), In total, 321 (69%) were HIV infected, and 232 (50%) patients
among those with chronic medical conditions and those taking had culture-positive TB. LED fluorescence microscopy was
immune-suppressive medications, the incremental cost effec- more sensitive than light microscopy with both the single-
tiveness ratio was more than $100,000 per QALY gained for specimen (61 vs. 55%) and two-specimen strategies (64 vs.
TST and IGRs. Hence, screening with any test would not be 56%). Overall, there was no statistically significant difference
considered cost effective. Moreover, in all populations, the dif- in sensitivity between the single-specimen and two-specimen
ference in QALYs was very small between the no-screening and strategies when smears were examined with light microscopy
either screening strategy. Screening resulted in a gain (com- (55 vs. 56%) or LED fluorescence microscopy (61 vs. 64%).
pared with no screening) of more than 0.1 QALYs only for Sensitivity was similar among the HIV-infected or uninfected
contacts and HIV-infected individuals. Screening all foreign- patients in the cohort.
born or other populations with TST or IGRA resulted in The Xpert MTB/RIF Assay is an automated molecular-based
a net gain of less than 0.05 QALYs, which is equivalent to less diagnostic developed for the GeneXpert platform (Cepheid, Sun-
than 1 month gained. nyvale, CA). This test has potential application as a rapid point of
This analysis highlights the two major limitations of current care test for detection of Mycobacterium tuberculosis and rifampin
LTBI screening and prevention strategies: (1) None of the cur- (RIF)-resistant TB. Several high-prevalence setting studies
rently available tests for LTBI can accurately predict who will prompted the WHO to endorse adoption of this test in 2010, with
develop active TB. Hence, many persons must be treated to more recent studies confirming the excellent performance charac-
prevent a single case. (2) The current standard treatment of teristics of the Xpert MTB/RIF assay (13–15). Questions remain
9 months of isoniazid (INH) has important toxicities, and com- regarding implementation of the Xpert MTB/RIF assay in resource-
pletion rates averaged less than 50% in the studies cited by limited settings, including selection of patients to test, effects of
Linas. Diagnostic tests that would better identify who will de- ambient conditions on diagnostic accuracy, and diagnostic per-
velop TB, plus simpler and shorter treatments, such as the re- formance in paucibacillary disease as is often the case in chil-
cently reported 3-month, once weekly regimen of INH and dren, extrapulmonary TB and HIV-infected individuals. Theron
rifapentine (10), may make TB prevention more feasible, ac- and colleagues used single archived spot sputum samples from
ceptable, and cost effective. The search for better tools for 496 South African patients with suspected TB and found that
LTBI must continue. sample volume and sputum processing methods had a nonsignif-
icant impact on diagnostic performance of Xpert MTB/RIF
(16). Xpert MTB/RIF detected 95% (89 of 94) of culture-
DIAGNOSIS OF TUBERCULOSIS AND LATENT positive TB cases with a specificity of 94% (320 of 339). Bacterial
TB INFECTION load, indicated by smear grade and culture time-to-positivity,
Worldwide, acid-fast bacilli (AFB) sputum smear microscopy is correlated strongly with performance. For example, the sensi-
the most widely used method for identifying TB cases. AFB spu- tivity in smear-negative cases was 55% (12 of 22). Relative to
tum smear microscopy is inexpensive and rapid, but it is insen- smear microscopy, Xpert MTB/RIF detected an additional 33
sitive. In 2010, there were 5.7 million notifications of new and cases (confirmed by culture or an alternative diagnostic method)
recurrent cases of TB, equivalent to 65% (range, 63–68%) of representing a 35% relative increase in the rapid TB case detec-
the estimated number of incident cases (1). Testing new strate- tion rate. However, sensitivity of Xpert MTB/RIF was lower in
gies to improve on smear microscopy is an important area of HIV-infected compared with HIV-uninfected patients.
research and an urgent priority for global TB control (11). The Xpert MTB/RIF has quantitative capabilities reported as
There are little data on adherence to international standards threshold cycle (Ct) outputs that, if shown to correlate with bac-
for TB diagnosis and the quality of investigations of TB suspects. terial burden, could provide measures of disease severity,
1268 AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE VOL 185 2012

response to therapy, risk of transmission, and need for infection No currently available test for LTBI provides a direct diag-
control. Blakemore and colleagues (17) used 2008 samples along nosis of infection. Enthusiasm for IGRAs has been driven by
with data collected from 741 patients enrolled in a previously the enhanced specificity achieved by the use of antigens that
published multisite clinical trial (13) to compare Xpert MTB/ are more specific for M. tuberculosis than the antigens used
RIF assay quantitative output with results of direct and concen- for the TST. However, the ability of IGRAs to predict those
trated sputum smears, semiquantitative Lowenstein–Jensen who will progress to active disease remains poorly defined. Diel
solid culture, and time-to-detection in liquid culture, with and and colleagues published an update of a cohort of close contacts
without adjustment for PCR inhibition measures. Decreasing in Germany, expanding the study population to 1,335 close con-
M. tuberculosis Ct was associated with increasing smear micros- tacts of smear-positive cases tested with both TST and IGRA
copy grade directly from sputum and concentrated sputum pellets. (QuantiFERON-TB Gold in-tube [QFT]; Cellestis Ltd, Aus-
A Ct cutoff of approximately 27.7 best predicted smear-positive tralia) and followed for up to 4 years to determine whether
status. However, the association between M. tuberculosis Ct and active TB developed (21). They found that the IGRA results,
time-to-detection in liquid culture and semiquantitative colony but not the TST results, were associated with duration of expo-
counts was weaker than smear. Despite a generally good correla- sure to an index case (P ¼ 0.0001). They also found that, despite
tion, considerable variation was observed in the Xpert’s quantita- being close contacts of smear positive cases, an unexpectedly
tive estimate among sputum samples within the same acid-fast high number of QFT-positive contacts (n ¼ 147) declined LTBI
bacilli grade. The authors noted that this observation could be treatment, among whom 19 developed active TB. The resultant
caused by variability within individual sputum samples, the inher- progression rate of close contacts who were QFT positive was
ent inaccuracy of smear grading, or unexplained variation in the greater than that of the TST regardless of TST cutoff (12.9% for
Xpert MTB/RIF assay. QFT positives vs. 3.1% at a 5-mm cutoff and 4.8% at a 10-mm
The notable advantages of newer molecular-based tests not- cutoff). Of note, 28.6% (6 of 21) QFT-positive children devel-
withstanding, rapid and affordable culture-based techniques for oped active TB, which is significantly higher than the 10.3%
detection of TB and MDR-TB are still needed. The microscopic- (13 of 126) QFT-positive adults (P ¼ 0.03). None of the 413
observation drug susceptibility (MODS) assay is a low-cost TST-positive, QFT-negative subjects progressed to active TB
method that could be useful to test large numbers of patients disease over the course of follow-up. This study provides evi-
in resource-limited settings where the cost of Xpert MTB/RIF dence to suggest that QFT is more reliable than the TST for
cartridges might be prohibitive. Shah and colleagues (18) eval- predicting TB among close contacts in a low-incidence setting.
uated the diagnostic accuracy of MODS among 534 consecu- However, in a recent systematic review of this topic, in a subset
tively enrolled patients with TB at a district level hospital in of five studies with 6,995 subjects that directly compared TST
rural South Africa. Of these subjects, 388 (73%) were HIV and IGRA, the authors concluded that the abilities of IGRAs or
positive, with a median CD4 count of 161 cells/mm3. Median TST to predict active TB were “much the same” (22).
turnaround time for MDR-TB diagnosis was 7 days (IQR, 6–9)
with MODS versus 70 days (IQR, 49–96) with an indirect pro-
portion method (P ¼ 0.001); this dramatic difference in time to TREATMENT OF TB AND LATENT TB INFECTION
detection should translate to earlier appropriate treatment ini- Shortening treatment for newly diagnosed active TB from the
tiation. MODS test performance did not differ by HIV status, current 6-month regimen to 3 or 4 months could benefit patients
with sensitivity of 88 versus 90% and specificity of 97 versus and TB control programs by reducing default and enhancing
100% for HIV positive versus HIV negative subjects, respec- treatment success. One drug that might allow substantial short-
tively. Finally, the negative predictive values of 94 to 99% with ening of therapy while maintaining high efficacy is rifapentine
the MODS assay in this study suggest that this could be an (RPT), a rifamycin with a prolonged half-life. Zhang and col-
affordable option to rapidly exclude active TB in patients being leagues (23) used a mouse model with BALBc and nude
considered for isoniazid preventative therapy (IPT). (thymic-deficient) mice to evaluate the use of RPT instead of
Another approach to excluding TB disease before initiation RIF throughout therapy. Two months of daily INH, RPT, and
of IPT is to rely on a symptom screen (19). The benefit of adding pyrazinamide followed by 1 month of daily RPT and INH
a chest X-ray (CXR) to the screening process, as has been (2HPZ/1HP) was associated with rapid clearance of bacilli but
advocated by the WHO is not known. Using data from the significant relapse rates in nude mice or in BALBc mice given
Tuberculosis Prevention Program in Botswana, Samandari cortisone. However, there were no relapses after treatment with
and colleagues (20) conducted an analysis of the costs and 2HPZ/4HP in either group of mice. The authors concluded that
consequences (including death and isoniazid- and multidrug- therapy of 4 or 5 months might be sufficient, but this treatment
resistant TB) of adding CXR to symptom-based screening was not tested. Such mouse studies provide an indication of
activities in a hypothetical cohort of 10,000 HIV-infected indi- efficacy and suggest which combination of drugs to pursue fur-
viduals. A decision analytic model was used to compare a ther. Establishing efficacy of a candidate drug in clinical trials,
‘‘Symptom only’’ policy against a ‘‘Symptom 1 CXR’’ policy. however, has proved to be a significant challenge. The measure
They found that the “Symptom 1 CXR” policy prevented 16 most commonly used to assess efficacy in phase 2 trials, the
isoniazid-resistant and 0.3 multidrug-resistant TB cases. How- sputum culture status on solid media at 2 months after therapy
ever, as a consequence of attrition from the screening process, initiation, has recently come under scrutiny. Nahid and col-
there were 98 excess cases of TB, 15 excess deaths, and an addi- leagues provide a TB biomarker and surrogate endpoint research
tional cost of $127,100 for the cohort. The investigators found roadmap that includes the development of a TB biorepository
that a CXR screening policy would only be beneficial when at- that could support future biomarker discovery and validation
trition was close to 0%. However, this would not be feasible or programs (24).
affordable for resource-constrained countries such as Botswana This same group found that treatment of the thymically de-
because elimination of attrition would cost $2.8 million per death ficient mice with the standard regimen of 2HRZ/4HR resulted in
averted. These findings did not change in best- and worst-case frequent emergence of INH monoresistant strains, which was
scenario analyses and suggest that IPT would exert its greatest prevented by adding ethambutol (EMB), a point of interest
benefit when there is minimal attrition during the screening pro- given the limited data on whether EMB helps to prevent resis-
cess and more HIV-infected individuals receive treatment. tance. EMB was effective even though it was only given during
Pulmonary, Sleep, and Critical Care Updates 1269

the initial 2 months of therapy, emphasizing that this is the crit- seems imperative to include coinfected patients in all phases of
ical period to prevent the emergence of resistance (i.e., when the drug development and in phase 1, 2, and 3 trials.
bacillary load is high).
Louw and colleagues (25) demonstrated that RIF-resistant
TREATMENT OF NONTUBERCULOUS MYCOBACTERIA
strains could be made susceptible to RIF by coadministration of
verapamil or reserpine. These compounds could overcome RIF Mycobacterium abscessus complex is comprised of three closely
resistance by preventing efflux of RIF, which increased intra- related species: M. abscessus (sensu stricto) (referred to as M.
cellular RIF concentrations. These in vitro findings were con- abscessus), M. massiliense, and M. bolletii; however, little is
firmed in mice infected with RIF monoresistant strains that known regarding the clinical presentation and treatment re-
responded to treatment with RIF and verapamil or with RIF sponse of the different species within the complex. Using ar-
and reserpine but did not respond to treatment with any of chived clinical isolates of M. abscessus complex, Koh and
these three drugs alone. The duration of this effect is unknown, colleagues (29) performed molecular identification of the spe-
but these findings suggest that novel approaches to therapy of cies and then compared clinical characteristics and outcomes of
patients with limited options, such as the recently reported treatment between 64 patients with M. abscessus lung disease
patients with totally drug-resistant strains (26) in whom resto- and 81 patients with M. massiliense lung disease. Whereas the
ration of RIF efficacy could have major benefits. clinical and radiographic manifestations of disease were similar,
Shorter, safer, and more effective therapy for LTBI would the proportion of patients with durable sputum conversion in
represent a major advance for TB control and could significantly response to a clarithromycin-based regimen was higher in
accelerate progress toward TB elimination. Zhang and col- patients with M. massiliense infection (88%) as compared with
leagues (27) evaluated several short-course LTBI treatment M. abscessus infection (25%; P , 0.001). This difference is
regimens in a mouse model of LTBI, in which mice received likely explained by the fact that inducible resistance to clari-
aerosolized recombinant BCG vaccine and then a low-dose thromycin was found in all tested M. abscessus isolates (n ¼
aerosol of virulent M. tuberculosis 6 weeks later. Of the regi- 19) but in none of the M. massiliense isolates (n ¼ 28).
mens tested, INH alone for up to 6 months was least effective.
Results were similar with daily RIF alone for up to 4 months,
CONCLUSIONS
daily INH and RIF for 3 months, INH and RPT once weekly for
3 months, or daily TMC207 for up to 4 months. All regimens The past decade has seen an explosion of research in TB epide-
achieved superior results compared with INH alone. Results miology, diagnosis, and treatment that has not been seen since
with daily RPT given alone were better than all these other the 1960s. The payoff from research is always slow, but the recent
regimens, although the best regimen was the combination of downturn in global incidence, for the first time in 20 years, sug-
TMC207 and RPT daily, which resulted in complete clearance gests that payoff may be happening. The resurgence of TB in the
of bacteria in the mouse lung within 1 month. The lowest re- 1980s is a reminder that M. tuberculosis is a worthy adversary,
lapse rates were seen with RPT daily. ready to stage an impressive comeback if the attention of the
These results suggest that RPT alone or TMC207 plus RPT medical and scientific community turns elsewhere. Now that
given daily for 1 to 2 months may be adequate for LTBI ther- progress is being made on the scientific and public health fronts,
apy. Given that the half-life of RPT is five times longer than it is not the time to turn away from TB but rather to continue
RIF, it is possible that daily RPT is successful because serum present efforts to find better diagnostic and treatment tools and
concentrations are very high after the first few days. Pharma- strategies to achieve a permanent reduction in global TB.
cokinetic studies will be useful to assess this. (One may specu- Author disclosures are available with the text of this article at www.atsjournals.org.
late that higher dosing of RIF could achieve similar effects as
daily RPT.) Safety and tolerability studies of daily RPT in
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