UNIVERSIDADE ESTADUAL DE MARING

ESPECIALIZAO EM BIOTECNOLOGIA
TURMA 5 2014
FUNDAMENTOS DE BIOINFORMTICA

ATIVIDADE DE FUNDAMENTOS DE BIOINFORMTICA

DIEGO IGOR ALVES FERNANDES DE ARAJO

MAT. PG 69769

JOO PESSOA PB
AGOSTO / 2015

Atividade 1 de Bioinformtica Prof. Dr. Joo Pamphile

Utilizando a ferramenta BLASTN do http://www.ncbi.nlm.nih.gov/ identifique os
organismos a que pertencem as sequncias abaixo:
Sequncia-1
GGGAACGCGCTCGGCGCACCAGAAACCTTTGTGAACTTATACCTTACTGTT
GCCTCGGCGCAGGCCGGCCTCCCTGGAGGCCCCTCTGAGAGGAGGAGC
AGCCCGCCGGCGGCCAACTAAACTCTTGTTTCTTAGTGAATCTCTGAGTAA
AAAAACATAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATC
GATGAAGACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTG
AATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCGGAGGGCA
TGCCTGTTCGAGCGTCATTTCAACCCTCAAGCACTGCTTGGTGTTGGGGCA
CCGCCTGTAAAAGGGCGGGCCCTGAAATCTAGTGGCGAGCTCGCCAGGA
CCCCGAGCGTAGTAGTTACATCTCGCTCTGGAAGGCCCTGGCGGTGCCCT
GCCGTTAAACCCCCAACTTCTGAAATTTTGACCTCGGATCAGGTAGGAATAC
CCGCTGAACTTAAGCATATCA
Phomopsis sp. G11-14 internal transcribed spacer 1, partial sequence;
5.8S ribosomal RNA gene, complete sequence; and internal transcribed
spacer 2, partial sequence
Organismo: Phomopsis sp. G11-14
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Sordariomycetes; Sordariomycetidae; Diaporthales; Valsaceae;
Phomopsis.
Autores: Rhoden,S.A., Garcia,A., Rubin Filho,C.J., Azevedo,J.L. , Pamphile,J.A.

Sequncia-2
GGGATATGATGGAACGCGCGTCGGCGCACCAGAAACCTTTGTGAACTTATA
CCTTACTGTTGCCTCGGCGCAGGCCGGGCCTCCCTGGAGGCCCCTCTGA
GAGGAGGAGCAGCCCGCCGGCGGCCAACTAAACTCTTGTTTCTTAGTGAA
TCTCTGAGTAAAAAAACATAATGAATCAAAACTTTCAACAACGGATCTCTTGG
TTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCA
GAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTC
CGGAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCACTGCTTGG
TGTTGGGGCACCGCCTGTAAAAGGGCGGGCCCTGAAATCTAGTGGCGAGC
TCGCCAGGACCCCGAGCGTAGTAGTTACATCTCGCTCTGGAAGGCCCTGG
CGGTGCCCTGCCGTTAAACCCCCAACTTCTGAAATTTTGACCTCGGATCAG
GTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGGAAGGAA
Phomopsis sp. G10-20 internal transcribed spacer 1, partial sequence;
5.8S ribosomal RNA gene, complete sequence; and internal transcribed
spacer 2, partial sequence
Organismo: Phomopsis sp. G10-20
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Sordariomycetes; Sordariomycetidae; Diaporthales; Valsaceae;
Phomopsis.
Autores: Rhoden,S.A., Garcia,A., Rubin Filho,C.J., Azevedo,J.L., Pamphile,J.A.

Sequncia-3
GGATGCTGGAACGCGCCTCGGGCGCACCAGAAACCTTTGTGAACTTATAC
CTTACTGTTGCCTCGGCGCAGGCCGGCCTCCCTGGAGGCCCCTCTGAGA
GGAGGAGCAGCCCGCCGGCGGCCAACTAAACTCTTGTTTCTTAGTGAATCT
CTGAGTAAAAAAACATAATGAATCAAAACTTTCAACAACGGATCTCTTGGTTC
TGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGA
ATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTCTGGTATTCCG
GAGGGCATGCCTGTTCGAGCGTCATTTCAACCCTCAAGCACTGCTTGGTGT
TGGGGCACCGCCTGTAAAAGGGCGGGCCCTGAAATCTAGTGGCGAGCTC
GCCAGGACCCCGAGCGTAGTAGTTACATCTCGCTCTGGAAGGCCCTGGCG
GTGCCCTGCCGTTAAACCCCCAACTTCTGAAATTTTGACCTCGGATCAGGT
AGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAACATACACT
AAAAAA
Phomopsis sp. G9-38 internal transcribed spacer 1, partial sequence; 5.8S
ribosomal RNA gene, complete sequence; and internal transcribed spacer
2, partial sequence
Organismo: Phomopsis sp. G9-38
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Sordariomycetes; Sordariomycetidae; Diaporthales; Valsaceae;
Phomopsis.
Autores: Rhoden,S.A.,
Pamphile,J.A.

Garcia,A.,

Rubin

Filho,C.J.,

Nakamura,C.V.,

Sequncia-4
AAGGGACTATTATGAGTTAACAACTCCAAACCTGTGAACATACTACTGTTGC
TTCGGCGGGACCGCCCCGGGCGCCTTCGCGGTGCCCCGGAACCAGGCG
CCCGCCGGGGACATCAAACTCTTGATTGTTATAGTGGCATTCTCTGAGTAAA
ACATACAAATAAGTCAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCG
ATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTG
AATCATCGAATCTTTGAACGCACATTGCGCCCGCTAGTATTCTGGCGGGCAT
GCCTGTCTGAGCGTCATTTCAACCCTCGCCCCCGGCTTCTGCTGGGAGCG
GTGTTGGGGATCGGCCGCCCGTCACTGGGAGGCCGGCCCCGAAATAGAG
TGGCGACCACGCCGTGTGCTCCTCTGCGTAGTAGTAAATCACCTCGCAGG
CGGACAGCGGTGCGGCCTGCCGTAAAACCCCCAACTCTTTCTGGTTGACC
TCAGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAA
Cordyceps memorabilis internal transcribed spacer 1, partial sequence;
5.8S ribosomal RNA gene, complete sequence; and internal transcribed
spacer 2, partial sequence
Organismo: Cordyceps memorabilis
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Sordariomycetes; Hypocreomycetidae; Hypocreales; Cordycipitaceae;
Cordyceps.
Autores: Rhoden,S.A.,
Pamphile,J.A.

Garcia,A.,

Rubin

Filho,C.J.,

Nakamura,C.V.,

Sequncia-5
GGGGACTATTGACTGGAACGCAGCGTATCGGCGCACCAGAAACCTTTGTG
AACTTATACCTATTGTTGCCTCGCGCGTCAGGCCGGCCTCTTCACTGAGGC
CCCCCGCGAGACGGGGAGCAGCCCGCCGGCGGCCAACTAAACTCTTGTT
TCTATAGTGAATCTCTGAGTAAAAAACATAAATGAATCAAACTTTCAACAACG
GATCTCTTGGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTA
ATGTGAATTGCGGAATTCACGTGAATCATCGAATCTTTGAACGCACATTGCG
CCCCCTGGTATTCCCGGGGGGCATGCCTGTTCGAGCGTCATTTCAACCCT
CAAGCCTGGCTTGGTGATGGGGCACTTGGTTCCGAGAGGAGCCGGCCCT
GGAAATTCCGTTGGCGAAGCTCGCCCAGGACCCCCGAGCGTTAGTAGTTAT
ATCTCCGCTTTGGAAGGGCCTGGCGGTGCCCTGCCGTTAAACCCCAACTC
CTGAAAATTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATAT
CATAAGCGGAAGA
Diaporthe longicolla strain G9-10 internal transcribed spacer 1, partial
sequence; 5.8S ribosomal RNA gene, complete sequence; and internal
transcribed spacer 2, partial sequence
Organismo: Diaporthe longicolla
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Sordariomycetes; Sordariomycetidae; Diaporthales; Diaporthaceae;
Diaporthe.
Autores: Rhoden,S.A.,
Pamphile,J.A.

Garcia,A.,

Rubin

Filho,C.J.,

Nakamura,C.V.,